RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCDC68Q9H2F9 335 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 IKZF5Q9H5V7 419 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SIAEQ9HAT2 523 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SP110Q9HB58 689 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 NMUR1Q9HB89 426 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ITM2CQ9NQX7 267 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 FAM118AQ9NWS6 357 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 FBXO10Q9UK96 956 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SLC30A1Q9Y6M5 507 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 DEAF1O75398 565 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 TBX18O95935 607 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CST1P01037 141 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FTH1P02794 183 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 MMP2P08253 660 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CTSHP09668 335 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 KCNE1P15382 129 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 GSSP48637 474 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 TPTEP56180 551 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CHRNB3Q05901 458 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SIM2Q14190 667 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 INAQ16352 499 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 GTDC1Q4AE62 458 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SULT1C3Q6IMI6 304 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FAM126BQ8IXS8 530 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 PHACTR4Q8IZ21 702 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 LGI2Q8N0V4 545 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 PGBD5Q8N414 524 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 BPIFB1Q8TDL5 484 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 RPL3LQ92901 407 aaKnown RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SEMA3CQ99985 751 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SLC25A51Q9H1U9 297 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CATSPERBQ9H7T0 1116 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 AIG1Q9NVV5 245 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 TMEM9Q9P0T7 183 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 DNMT3BQ9UBC3 853 aaKnown RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 LEF1Q9UJU2 399 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 IQCF5A8MTL0 148 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FZD9O00144 591 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 KPNA4O00629 521 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CNOT3O75175 753 aaKnown RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 E2F6O75461 281 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 MATN4O95460 622 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 POMCP01189 267 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FGF4P08620 206 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FDXRP22570 491 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SEPHS1P49903 392 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 IL5RAQ01344 420 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 OXA1LQ15070 435 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 ANKS6Q68DC2 871 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 CLHC1Q8NHS4 586 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 MBOAT4Q96T53 435 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 GPR21Q99679 349 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SMOC2Q9H3U7 446 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 ATP13A3Q9H7F0 1226 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 RMI1Q9H9A7 625 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 MRGBPQ9NV56 204 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.84e-8■■■■□ 19.8
PTPRA-203ENST00000356147 VAPAQ9P0L0 249 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 ZMYM5Q9UJ78 669 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 FAM32AQ9Y421 112 aaKnown RBP10.03□□□□□ -0.8
PTPRA-203ENST00000356147 SNX5Q9Y5X3 404 aa10.03□□□□□ -0.8
PTPRA-203ENST00000356147 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 TRIM64BA6NI03 449 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ARVCFO00192 962 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 MUSKO15146 869 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 B3GAT3O94766 335 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 PRSS23O95084 383 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 WISP3O95389 354 aaPredicted RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 PEX11BO96011 259 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 CNPP09543 421 aaKnown RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 BEX3Q00994 111 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 PTGR1Q14914 329 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ADPRMQ3LIE5 342 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 AASDHQ4L235 1098 aaPredicted RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 SGO1Q5FBB7 561 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 C6orf136Q5SQH8 315 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 CATSPEREQ5SY80 951 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 SMYD5Q6GMV2 418 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 PTRH1Q86Y79 214 aaKnown RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 RIMKLAQ8IXN7 391 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 TERB1Q8NA31 727 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ELMO1Q92556 727 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 NCLNQ969V3 563 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 IMP4Q96G21 291 aaKnown RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF347Q96SE7 839 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 BARD1Q99728 777 aaKnown RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 RTP3Q9BQQ7 232 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 LRRC3Q9BY71 257 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 HPS4Q9NQG7 708 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ATAD3AQ9NVI7 634 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF229Q9UJW7 825 aa10.02□□□□□ -0.8
PTPRA-203ENST00000356147 GPC6Q9Y625 555 aaPredicted RBP10.02□□□□□ -0.8
PTPRA-203ENST00000356147 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.81
PTPRA-203ENST00000356147 SYCE1LA8MT33 242 aa10.02□□□□□ -0.81
PTPRA-203ENST00000356147 M0R3G1 203 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms