RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 C9orf16Q9BUW7 83 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 MARCH5Q9NX47 278 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 EBF1Q9UH73 591 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 ANAPC2Q9UJX6 822 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 E2F3O00716 465 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 KDELR3O43731 214 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 FOXD2O60548 495 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-201ENST00000354547 VPS4BO75351 444 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 SNAP29O95721 258 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 MLYCDO95822 493 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 G6PDP11413 515 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 GGT5P36269 586 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 CDH4P55283 916 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 MRPL58Q14197 206 aaKnown RBP19.34■□□□□ 0.69
COL13A1-201ENST00000354547 SELPLGQ14242 412 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 NR6A1Q15406 480 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 PYCR3Q53H96 274 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 Q6ZSR9 355 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 DBF4BQ8NFT6 615 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 PROKR1Q8TCW9 393 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 BIRC7Q96CA5 298 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 GLT1D1Q96MS3 346 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 TRIM54Q9BYV2 358 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 LEF1Q9UJU2 399 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-201ENST00000354547 PCDHB7Q9Y5E2 793 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 FADS3Q9Y5Q0 445 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 TMEM88BA6NKF7 163 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 H3BNC9 293 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 FFAR3O14843 346 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 GPR42O15529 346 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 COCHO43405 550 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 TTPAP49638 278 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 SGO1Q5FBB7 561 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 TMEM214Q6NUQ4 689 aaKnown RBP19.33■□□□□ 0.69
COL13A1-201ENST00000354547 TM6SF2Q9BZW4 377 aa19.33■□□□□ 0.69
COL13A1-201ENST00000354547 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.33■□□□□ 0.69
COL13A1-201ENST00000354547 INPPL1O15357 1258 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 GDF5P43026 501 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 RANBP1P43487 201 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 MAPK10P53779 464 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 ERVK-8P63133 956 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 TBPL2Q6SJ96 375 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 SFRP1Q8N474 314 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 APOL5Q9BWW9 433 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 GPR63Q9BZJ6 419 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 FCF1Q9Y324 198 aaKnown RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 MAGED1Q9Y5V3 778 aaPredicted RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 MKI67P46013 3256 aaKnown RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 TMX2-CTNND1H3BSU7 103 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 ACOX3O15254 700 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 ALDH3B2P48448 385 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 SEMG2Q02383 582 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 INTS11Q5TA45 600 aaKnown RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 DNAJC14Q6Y2X3 702 aaPredicted RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 GPR141Q7Z602 305 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 CARNMT1Q8N4J0 409 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 CLDN19Q8N6F1 224 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 CDC14AQ9UNH5 594 aa19.33■□□□□ 0.68
COL13A1-201ENST00000354547 POLR3HQ9Y535 204 aaPredicted RBP19.33■□□□□ 0.68
COL13A1-201ENST00000354547 OR1D2P34982 312 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 CREB5Q02930 508 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 XKR7Q5GH72 579 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 OGFOD2Q6N063 350 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 TRAF7Q6Q0C0 670 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 FAM151BQ6UXP7 276 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 RNF180Q86T96 592 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 CHID1Q9BWS9 393 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 PREBQ9HCU5 417 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 RIC8BQ9NVN3 520 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 PLXNA3P51805 1871 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 EEDO75530 441 aaKnown RBP19.32■□□□□ 0.68
COL13A1-201ENST00000354547 CR2P20023 1033 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 NFKBIAP25963 317 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 MZF1P28698 734 aaPredicted RBP19.32■□□□□ 0.68
COL13A1-201ENST00000354547 ATP6AP1Q15904 470 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 GLYATQ6IB77 296 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 ZBTB46Q86UZ6 589 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 ADGRE3Q9BY15 652 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 RNF186Q9NXI6 227 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 LRFN2Q9ULH4 789 aa19.32■□□□□ 0.68
COL13A1-201ENST00000354547 STX16O14662 325 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 LDLRP01130 860 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 PRR35P0CG20 571 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 RFC2P35250 354 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 STT3AP46977 705 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 HSPA7P48741 367 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 GALK1P51570 392 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 ESRRGP62508 458 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 FAM189BP81408 668 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 PRKG2Q13237 762 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 ALG1LQ6GMV1 187 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 FAM126BQ8IXS8 530 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 DHRSXQ8N5I4 330 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 OR4F6Q8NGB9 312 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 DTNBP1Q96EV8 351 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 BOCQ9BWV1 1114 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 RNF38Q9H0F5 515 aa19.31■□□□□ 0.68
COL13A1-201ENST00000354547 NSUN3Q9H649 340 aaKnown RBP19.31■□□□□ 0.68
COL13A1-201ENST00000354547 HACD3Q9P035 362 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms