RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FRG2BQ96QU4 278 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 WDR83Q9BRX9 315 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 KCNK15Q9H427 330 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 NOL11Q9H8H0 719 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MINDY3Q9H8M7 445 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ACTR5Q9H9F9 607 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EPB41L5Q9HCM4 733 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 DNAJC11Q9NVH1 559 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CYP39A1Q9NYL5 469 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CWC15Q9P013 229 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 DNAJB4Q9UDY4 337 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GMEB2Q9UKD1 530 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 LAMP3Q9UQV4 416 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MYO3AQ8NEV4 1616 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CTDSPLO15194 276 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FOXN1O15353 648 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 AP5Z1O43299 807 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF202O95125 648 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SBK2P0C263 348 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CBSLP0DN79 551 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CHRNB1P11230 501 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HOXA13P31271 388 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CBSP35520 551 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MAGEB1P43366 347 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CLCNKBP51801 687 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 UCP2P55851 309 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CD81P60033 236 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 GFPT1Q06210 699 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRKAA1Q13131 559 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PROSER3Q2NL68 480 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TEDDM1Q5T9Z0 273 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DCAF12L2Q5VW00 463 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FAM91A1Q658Y4 838 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRSS55Q6UWB4 352 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TTLL10Q6ZVT0 673 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CYB5R4Q7L1T6 521 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SERPINA11Q86U17 422 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ARHGEF19Q8IW93 802 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZDHHC23Q8IYP9 409 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CLEC1AQ8NC01 280 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MCUQ8NE86 351 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NEK9Q8TD19 979 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CHURC1Q8WUH1 139 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRCCQ92733 491 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SNAPC3Q92966 411 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EXT2Q93063 718 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SPDL1Q96EA4 605 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 STAMBPL1Q96FJ0 436 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BSCL2Q96G97 398 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM68Q96MH6 324 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BBC3Q96PG8 261 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TEFMQ96QE5 360 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FAM110AQ9BQ89 295 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF559Q9BR84 538 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SPAG4Q9NPE6 437 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RCOR1Q9UKL0 485 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MTUS1Q9ULD2 1270 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RPH3AQ9Y2J0 694 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TSC22D4Q9Y3Q8 395 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NFE2L3Q9Y4A8 694 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PLB1Q6P1J6 1458 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TET3O43151 1660 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DLC1Q96QB1 1528 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SUPT6HQ7KZ85 1726 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 LRRD1A4D1F6 860 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ANXA2P2A6NMY6 339 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PPP6CO00743 305 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MEIS2O14770 477 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TTI1O43156 1089 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EGFP01133 1207 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD34CP0C6C1 535 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EEF2P13639 858 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HRH2P25021 359 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ARL1P40616 181 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CENPAP49450 140 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SCN1BQ07699 218 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SMC1AQ14683 1233 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PFKFB3Q16875 520 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ARMC4Q5T2S8 1044 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RNASEH2BQ5TBB1 312 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BRAT1Q6PJG6 821 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 Q6YL49 198 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TRIM72Q6ZMU5 477 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 LINC00696Q6ZRV3 163 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RHOUQ7L0Q8 258 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC190Q86UF4 302 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC83Q8IWF9 413 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MB21D2Q8IYB1 491 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BEST3Q8N1M1 668 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ARL6IP6Q8N6S5 226 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 C10orf53Q8N6V4 93 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 OR1J2Q8NGS2 313 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HES6Q96HZ4 224 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRMT6Q96LA8 375 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC17Q96LX7 622 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MUS81Q96NY9 551 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RAB3IPQ96QF0 476 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MSTO1Q9BUK6 570 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 UTP14AQ9BVJ6 771 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CDT1Q9H211 546 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms