RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PSME2Q9UL46 239 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CXorf49A8MYA2 514 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 WNT9AO14904 365 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ASNA1O43681 348 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 KERAO60938 352 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CPSF4O95639 269 aaKnown RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 MPSTP25325 297 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 HNMTP50135 292 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 NCALDP61601 193 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 NKX3-2P78367 333 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 RIPK1Q13546 671 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 XKR6Q5GH73 641 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 INTS11Q5TA45 600 aaKnown RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CMTM8Q8IZV2 173 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 IGSF8Q969P0 613 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CXorf40BQ96DE9 158 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 RECQL5O94762 991 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 EPN2O95208 641 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CTSEP14091 401 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 HNRNPLP14866 589 aaKnown RBP eCLIP12.04□□□□□ -0.483e-34■■■■■ 32.5
SMAD9-201ENST00000350148 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 STC1P52823 247 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CACNA2D1P54289 1103 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 DNAJB13P59910 316 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 FEM1AQ9BSK4 669 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 DERL2Q9GZP9 239 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ENTPD5O75356 428 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SEMA3DO95025 777 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 CLDN9O95484 217 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RHOP08100 348 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 TYRP14679 529 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 IDSP22304 550 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ASMTP46597 345 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 AP1S2P56377 157 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 DCTN2Q13561 401 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 TUBA3EQ6PEY2 450 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 KRT73Q86Y46 540 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 CILP2Q8IUL8 1156 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 NT5C3BQ969T7 300 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 GINS4Q9BRT9 223 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RAB11FIP5Q9BXF6 653 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 PGLSO95336 258 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ITGB1P05556 798 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ABRQ12979 859 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 KRR1Q13601 381 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ZNF549Q6P9A3 640 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 NELL1Q92832 810 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 EFHD2Q96C19 240 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 C8orf4Q9NR00 106 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ZNHIT2Q9UHR6 403 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SH3GLB1Q9Y371 365 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 HEBP2Q9Y5Z4 205 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SNAP91O60641 907 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 PSMG1O95456 288 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 COX7A2P14406 83 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 GNPDA1P46926 289 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ZNF570Q96NI8 536 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ARMC7Q9H6L4 198 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SLC22A3O75751 556 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 GSTM1P09488 218 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RPIAP49247 311 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RAD23AP54725 363 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 HERVK_113P63132 956 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 TUBA4AP68366 448 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 GSTM4Q03013 218 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SP140Q13342 867 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 TBCELQ5QJ74 424 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 LUZP2Q86TE4 346 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 OR13C4Q8NGS5 318 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 RAB7BQ96AH8 199 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ITCHQ96J02 903 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 TRMT61BQ9BVS5 477 aaKnown RBP12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 ADPRHL2Q9NX46 363 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 SH3BP4Q9P0V3 963 aa12.03□□□□□ -0.48
SMAD9-201ENST00000350148 PIPSLA2A3N6 862 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 LCHNA4D1U4 455 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 PEX11AO75192 247 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 AHSGP02765 367 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 LBX1P52954 281 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 EPS8Q12929 822 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 RSBN1Q5VWQ0 802 aaPredicted RBP12.02□□□□□ -0.48
SMAD9-201ENST00000350148 FIBINQ8TAL6 211 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 TWIST2Q8WVJ9 160 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 SCN3BQ9NY72 215 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 ATP6V1HQ9UI12 483 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 ASF1AQ9Y294 204 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 ATAD5Q96QE3 1844 aa12.02□□□□□ -0.48
SMAD9-201ENST00000350148 MT-CO1P00395 513 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms