RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RPL26L1Q9UNX3 145 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MYRFQ9Y2G1 1151 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TRBV23OR9-2A0A075B6M9 112 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 S100A3P33764 101 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CCNFP41002 786 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 KCNJ5P48544 419 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 NRG3P56975 720 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 SNTA1Q13424 505 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ATP1A4Q13733 1029 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TMEM198Q66K66 360 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MSANTD2Q6P1R3 559 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ZFP1Q6P2D0 407 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CMASQ8NFW8 434 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MOCOSQ96EN8 888 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 KCNU1A8MYU2 1149 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ADRA1BP35368 520 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 BMPR1AP36894 532 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 GSSP48637 474 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 GNA12Q03113 381 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FGL2Q14314 439 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CDHR3Q6ZTQ4 885 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TMC8Q8IU68 726 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 EXOC2Q96KP1 924 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 JSRP1Q96MG2 331 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 C17orf62Q9BQA9 187 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 HGH1Q9BTY7 390 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ELAC1Q9H777 363 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF180Q9UJW8 692 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RGS20O76081 388 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 LTA4HP09960 611 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 L1CAMP32004 1257 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ATP6V0D1P61421 351 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ROR2Q01974 943 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 NCF4Q15080 339 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TPRG1Q6ZUI0 275 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FAM46DQ8NEK8 389 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RP9Q8TA86 221 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ART5Q96L15 291 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FAM83CQ9BQN1 747 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MATN4O95460 622 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 LINC00032P0C843 101 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ATP5A1P25705 553 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PRKAG1P54619 331 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CARD16Q5EG05 197 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 OR10H5Q8NGA6 315 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MAGEE2Q8TD90 523 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 WRAP53Q9BUR4 548 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 GATA5Q9BWX5 397 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PAIP1Q9H074 479 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TEX264Q9Y6I9 313 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TPD52L2O43399 206 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TLX3O43711 291 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PGGT1BP53609 377 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ECT2LQ008S8 904 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CLEC6AQ6EIG7 209 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 GPR156Q8NFN8 814 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 RBM18Q96H35 190 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SLC25A23Q9BV35 468 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CARS2Q9HA77 564 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 WDR6Q9NNW5 1121 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 BPIFA1Q9NP55 256 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SERTAD3Q9UJW9 196 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 FBXO5Q9UKT4 447 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 NOX1Q9Y5S8 564 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MYH4Q9Y623 1939 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MDM4O15151 490 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ATP5F1P24539 256 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PER3P56645 1201 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SEMA5AQ13591 1074 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 GALNT3Q14435 633 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PLA2G4EQ3MJ16 856 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 VPS26BQ4G0F5 336 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PITRM1Q5JRX3 1037 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TRIM40Q6P9F5 258 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SATL1Q86VE3 508 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CFAP52Q8N1V2 620 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 OXR1Q8N573 874 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 C7orf57Q8NEG2 295 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TSPAN14Q8NG11 270 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MTFMTQ96DP5 389 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SUSD3Q96L08 255 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CIB1Q99828 191 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 STRA6Q9BX79 667 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 FZD8Q9H461 694 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 NOL11Q9H8H0 719 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms