RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PLEKHA8Q96JA3 519 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 EBPLQ9BY08 206 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PDP1Q9P0J1 537 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 C7orf72A4D263 438 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ARVCFO00192 962 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MED26O95402 600 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 IL1BP01584 269 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ANXA5P08758 320 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 G6PDP11413 515 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 IGFBP5P24593 272 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 RPL9P32969 192 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 SH3BP2P78314 561 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ZNF678Q5SXM1 525 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 RNF180Q86T96 592 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MARCH7Q9H992 704 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 NMUR1Q9HB89 426 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 H3BNH8 94 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 XPNPEP2O43895 674 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 UROSP10746 265 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 SLC5A2P31639 672 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 SLC16A1P53985 500 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 FOXA1P55317 472 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PFKPQ01813 784 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MAD2L1Q13257 205 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MED22Q15528 200 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 TECRLQ5HYJ1 363 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ADAMTSL2Q86TH1 951 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 FIBCD1Q8N539 461 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 HM13Q8TCT9 377 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.441e-10■■■■□ 20.9
SNRNP48-201ENST00000342415 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ITM2CQ9NQX7 267 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 GKN1Q9NS71 199 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 EHD3Q9NZN3 535 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MAGED1Q9Y5V3 778 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 COL1A2P08123 1366 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 DGKAP23743 735 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 GNPDA1P46926 289 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 KCNQ1P51787 676 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 RAB39AQ14964 217 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 TAZQ16635 292 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 ATXN7L2Q5T6C5 722 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 LIX1Q8N485 282 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 MRGPRX2Q96LB1 330 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 NME4O00746 187 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 TBX1O43435 398 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 PGLSO95336 258 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 C1RP00736 705 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 SERPINA1P01009 418 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 CDK4P11802 303 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 EDNRBP24530 442 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 AZGP1P25311 298 aaKnown RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 SOX6P35712 828 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 HNF4AP41235 474 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 TPTEP56180 551 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 ABRQ12979 859 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 PTGR1Q14914 329 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 RETSATQ6NUM9 610 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 SPATA19Q7Z5L4 167 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 ZNF605Q86T29 641 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 LRRC49Q8IUZ0 686 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 UBE2J2Q8N2K1 259 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 PIK3C3Q8NEB9 887 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 BRSK1Q8TDC3 778 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 LRTM1Q9HBL6 345 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 GDAP2Q9NXN4 497 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 ACTR3BQ9P1U1 418 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 EVLQ9UI08 416 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 KIAA0100Q14667 2235 aaKnown RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 OR1I1O60431 355 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 KPNA6O60684 536 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 TBL1XO60907 577 aa12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 ALOX15P16050 662 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-201ENST00000342415 IGFBP6P24592 240 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms