RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ADGRG6Q86SQ4 1221 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 FSTL5Q8N475 847 aaPredicted RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 TMEM151AQ8N4L1 468 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 TAS2R13Q9NYV9 303 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 NFKBIL1Q9UBC1 381 aaPredicted RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 TSPAN12O95859 305 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 IGHV4-34P06331 123 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ZNF8P17098 575 aaPredicted RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 MDH1P40925 334 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 PTPN5P54829 565 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 CDK3Q00526 305 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PHYKPLQ8IUZ5 450 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
PMS1-201ENST00000342075 SPEM1Q8N4L4 309 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 SNX19Q92543 992 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 SCYL1Q96KG9 808 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 UBXN10Q96LJ8 280 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 ALG9Q9H6U8 611 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ZNF395Q9H8N7 513 aaPredicted RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 NKIRAS1Q9NYS0 192 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 XPR1Q9UBH6 696 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 GULP1Q9UBP9 304 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 GNPTGQ9UJJ9 305 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 SCML1Q9UN30 329 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 TDRD6O60522 2096 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 IGHV1OR15-9A0A0B4J2B8 117 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 CDK14O94921 469 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 MPOP05164 745 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 CCT5P48643 541 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 SEC24CP53992 1094 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 GNGT1P63211 74 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 DNAJC3Q13217 504 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 TBC1D1Q86TI0 1168 aaPredicted RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 KCNJ9Q92806 393 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 BIRC7Q96CA5 298 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 DCUN1D1Q96GG9 259 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 NELL2Q99435 816 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 C19orf43Q9BQ61 176 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 RGSL1A5PLK6 1076 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 K7ESF4 209 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 CDC7O00311 574 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PLIN3O60664 434 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 VPS26AO75436 327 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PROCP04070 461 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 MAOBP27338 520 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PREPP48147 710 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ADARP55265 1226 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 HSPA14Q0VDF9 509 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 TMEM220Q6QAJ8 160 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 RPS27LQ71UM5 84 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 ACMSDQ8TDX5 336 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 ULK4Q96C45 1275 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 LINGO1Q96FE5 620 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
PMS1-201ENST00000342075 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
PMS1-201ENST00000342075 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 ATG13O75143 517 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 GLRA3O75311 464 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 KLHL2O95198 593 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 CRABP2P29373 138 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 SIGLEC14Q08ET2 396 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 OR4D1Q15615 310 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 LRRC8EQ6NSJ5 796 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 MACC1Q6ZN28 852 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 TRAPPC5Q8IUR0 188 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 OR2T34Q8NGX1 318 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 DYDC1Q8WWB3 177 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
PMS1-201ENST00000342075 CIDEBQ9UHD4 219 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 CEP192Q8TEP8 1941 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 CD1DP15813 335 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 TFEBP19484 476 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 BCKDHBP21953 392 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 RPS3P23396 243 aaKnown RBP eCLIP13.68□□□□□ -0.22
PMS1-201ENST00000342075 SRSF5Q13243 272 aaKnown RBP13.68□□□□□ -0.22
PMS1-201ENST00000342075 ITIH4Q14624 930 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 ATG14Q6ZNE5 492 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 RAVER1Q8IY67 606 aaKnown RBP13.68□□□□□ -0.22
PMS1-201ENST00000342075 EDAQ92838 391 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 ALKBH8Q96BT7 664 aaKnown RBP13.68□□□□□ -0.22
PMS1-201ENST00000342075 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 TTC1Q99614 292 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 CAPS2Q9BXY5 557 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 WDR26Q9H7D7 661 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 NMRAL1Q9HBL8 299 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 SSU72Q9NP77 194 aaKnown RBP13.68□□□□□ -0.22
PMS1-201ENST00000342075 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
PMS1-201ENST00000342075 PFDN6O15212 129 aa13.67□□□□□ -0.22
PMS1-201ENST00000342075 ZWINTO95229 277 aa13.67□□□□□ -0.22
PMS1-201ENST00000342075 C7P10643 843 aa13.67□□□□□ -0.22
PMS1-201ENST00000342075 BGNP21810 368 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms