RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CDH1P12830 882 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 GSTM2P28161 218 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 MRPS6P82932 125 aaKnown RBP22.15■■□□□ 1.14
TRIM28-202ENST00000341753 OXA1LQ15070 435 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 PGS1Q32NB8 556 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ARTNQ5T4W7 220 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 RBM23Q86U06 439 aaKnown RBP22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ZNF347Q96SE7 839 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 AMBRA1Q9C0C7 1298 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 MUC13Q9H3R2 512 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 HPS4Q9NQG7 708 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ZNF225Q9UK10 706 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CCDC162PA2VCL2 907 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 LDB2O43679 373 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 SNX2O60749 519 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 PEX11BO96011 259 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CHRNA1P02708 482 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 GSTT2P0CG29 244 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 GSTT2BP0CG30 244 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 FSHRP23945 695 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CTGFP29279 349 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ARL1P40616 181 aaPredicted RBP22.15■■□□□ 1.14
TRIM28-202ENST00000341753 COQ5Q5HYK3 327 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 PAQR3Q6TCH7 311 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ENPP6Q6UWR7 440 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 AGMOQ6ZNB7 445 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CADM3Q8N126 398 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 FNDC5Q8NAU1 212 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CHDHQ8NE62 594 aaPredicted RBP22.15■■□□□ 1.14
TRIM28-202ENST00000341753 FIG4Q92562 907 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 HMCESQ96FZ2 354 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ASB2Q96Q27 587 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 CORO1BQ9BR76 489 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 ARNT2Q9HBZ2 717 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 B3GNT3Q9Y2A9 372 aa22.15■■□□□ 1.14
TRIM28-202ENST00000341753 MROH6A6NGR9 719 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 CD3EAPO15446 510 aaKnown RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 DEAF1O75398 565 aaPredicted RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 CAPN15O75808 1086 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 GLP2RO95838 553 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 PRKACGP22612 351 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 HTR1EP28566 365 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 DGKQP52824 942 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 OCA2Q04671 838 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 TUBA3CQ13748 450 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 SKIV2LQ15477 1246 aaKnown RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 RBBP7Q16576 425 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 HPS1Q92902 700 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 LRRC3Q9BY71 257 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ATP13A1Q9HD20 1204 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 POLE4Q9NR33 117 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 FAM118AQ9NWS6 357 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 PDE10AQ9Y233 779 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 HS3ST4Q9Y661 456 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 MIA3Q5JRA6 1907 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 FGF10O15520 208 aaPredicted RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 KDM1AO60341 852 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ECI2O75521 394 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 RPS3AP61247 264 aaKnown RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 EMX2Q04743 252 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 C6orf141Q5SZD1 244 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ZNF362Q5T0B9 420 aaPredicted RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 MANEALQ5VSG8 457 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 SLCO6A1Q86UG4 719 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 RTL3Q8N8U3 475 aaKnown RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 SDCCAG3Q96C92 435 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ITCHQ96J02 903 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 MBOAT4Q96T53 435 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ATAD3AQ9NVI7 634 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 FAM32AQ9Y421 112 aaKnown RBP22.14■■□□□ 1.13
TRIM28-202ENST00000341753 ASB1Q9Y576 335 aa22.14■■□□□ 1.13
TRIM28-202ENST00000341753 G3V2T6 193 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 AQP9O43315 295 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 CNOT3O75175 753 aaKnown RBP22.13■■□□□ 1.13
TRIM28-202ENST00000341753 SLC26A3P40879 764 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 LHX1P48742 406 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 CD47Q08722 323 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 GALNT3Q14435 633 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 NKG7Q16617 165 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 PROSER1Q86XN7 944 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 ZDHHC13Q8IUH4 622 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 GIN1Q9NXP7 522 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 GALPQ9UBC7 116 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 TSC22D4Q9Y3Q8 395 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 TTC3P53804 2025 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 NPEPPSL1A6NEC2 478 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 ZNF846Q147U1 533 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 MARC1Q5VT66 337 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 ANKS6Q68DC2 871 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 SPATA19Q7Z5L4 167 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 DSG4Q86SJ6 1040 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 LEMD2Q8NC56 503 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 PROKR1Q8TCW9 393 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 PSMG2Q969U7 264 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 RTP3Q9BQQ7 232 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 PAK1IP1Q9NWT1 392 aaPredicted RBP22.13■■□□□ 1.13
TRIM28-202ENST00000341753 MTRRQ9UBK8 725 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 AASSQ9UDR5 926 aa22.13■■□□□ 1.13
TRIM28-202ENST00000341753 TSR3Q9UJK0 312 aaKnown RBP22.13■■□□□ 1.13
TRIM28-202ENST00000341753 JRKO75564 520 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms