RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 RXFP2Q8WXD0 754 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 LPPQ93052 612 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 MCCC2Q9HCC0 563 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 GMEB2Q9UKD1 530 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 Q9Y3F1 56 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 RALGAPA2Q2PPJ7 1873 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 KCNU1A8MYU2 1149 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 TSPAN4O14817 238 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 TPST1O60507 370 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 GLRA3O75311 464 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 ALDOAP04075 364 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 PCNAP12004 261 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 PDGFRAP16234 1089 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 GPR85P60893 370 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 TBCELQ5QJ74 424 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 RHOBTB2Q9BYZ6 727 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 ROGDIQ9GZN7 287 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 NECTIN3Q9NQS3 549 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 USP18Q9UMW8 372 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 SNX7Q9UNH6 387 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 KRT87PA6NCN2 255 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PABPN1LA6NDY0 278 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PTGESO14684 152 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 CST8O60676 142 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 RNGTTO60942 597 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 IL7RP16871 459 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 TFE3P19532 575 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 PCMT1P22061 227 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 KDELR1P24390 212 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 DNAJB2P25686 324 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 HOXC8P31273 242 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PTPN7P35236 360 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 GRK3P35626 688 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 ARHGDIAP52565 204 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PRMT2P55345 433 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 DPYSL3Q14195 570 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 KCNJ11Q14654 390 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PARP15Q460N3 678 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 PKDCCQ504Y2 493 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 MFSD14CQ5VZR4 134 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 DDIASQ8IXT1 998 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 FYTTD1Q96QD9 318 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 ZFP14Q9HCL3 533 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 GPATCH2LQ9NWQ4 482 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 ZC3H7BQ9UGR2 993 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 GTF2IRD1Q9UHL9 959 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 AURKCQ9UQB9 309 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 TRDMT1O14717 391 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 HSPA4LO95757 839 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 TP53P04637 393 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 CYP2A6P11509 494 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 IL7P13232 177 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 GPD1P21695 349 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 GGT5P36269 586 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 RPS9P46781 194 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 RABGGTBP53611 331 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 TOP3AQ13472 1001 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 HADHQ16836 314 aaKnown RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 LHX8Q68G74 356 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 SCYL2Q6P3W7 929 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 GK5Q6ZS86 529 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 DHFR2Q86XF0 187 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 MAGEE2Q8TD90 523 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 SLC35F5Q8WV83 523 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 RSAD2Q8WXG1 361 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 CENPNQ96H22 339 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 TOR3AQ9H497 397 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
RTN3-203ENST00000341307 ST3GAL5Q9UNP4 418 aa11.74□□□□□ -0.53
RTN3-203ENST00000341307 FAM159BA6NKW6 160 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 H3BMM5 538 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 CHRNA1P02708 482 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 SLC4A1P02730 911 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 LCP1P13796 627 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 ZNF250P15622 560 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 ZNF143P52747 638 aaPredicted RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 ATXN1P54253 815 aaKnown RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 NCS1P62166 190 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.539e-12■■□□□ 13.5
RTN3-203ENST00000341307 GRTP1Q5TC63 336 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 LRRC8EQ6NSJ5 796 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 SYCE2Q6PIF2 218 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
RTN3-203ENST00000341307 DPY19L3Q6ZPD9 716 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 PLEKHM3Q6ZWE6 761 aa11.73□□□□□ -0.53
RTN3-203ENST00000341307 AMIGO1Q86WK6 493 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms