RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 YWHABP31946 246 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC1A6P48664 564 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PLA2G16P53816 162 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TFCP2Q12800 502 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MTMR1Q13613 665 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HADHQ16836 314 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PAN2Q504Q3 1202 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PIGGQ5H8A4 983 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C6orf132Q5T0Z8 1188 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ANKRD22Q5VYY1 191 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HTR3DQ70Z44 454 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 REM2Q8IYK8 340 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 OXR1Q8N573 874 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TMC2Q8TDI7 906 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RAD54LQ92698 747 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ATOH1Q92858 354 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MBOAT7Q96N66 472 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C3orf14Q9HBI5 128 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MRPL47Q9HD33 250 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM216Q9P0N5 145 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC17A7Q9P2U7 560 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ARPP21Q9UBL0 812 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ACOT9Q9Y305 439 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PCDHAC2Q9Y5I4 1007 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LCMT2O60294 686 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CETPP11597 493 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LCP1P13796 627 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ABATP80404 500 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GPR139Q6DWJ6 353 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PDE12Q6L8Q7 609 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TIFABQ6ZNK6 161 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HID1Q8IV36 788 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ZC3H3Q8IXZ2 948 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LCORLQ8N3X6 602 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TRPV1Q8NER1 839 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C1orf54Q8WWF1 131 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DBNDD2Q9BQY9 259 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC30A2Q9BRI3 323 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 COPS4Q9BT78 406 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ITPAQ9BY32 194 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LHPPQ9H008 270 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 BTBD1Q9H0C5 482 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DCSTAMPQ9H295 470 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PDZD7Q9H5P4 517 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RSAD1Q9HA92 442 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C11orf16Q9NQ32 467 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CTPS2Q9NRF8 586 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 BABAM2Q9NXR7 383 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C3orf18Q9UK00 162 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PCDHB7Q9Y5E2 793 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DGKBQ9Y6T7 804 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ATRNO75882 1429 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C7orf72A4D263 438 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 A6NJY4 79 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MEN1O00255 615 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GNRH1P01148 92 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NUDT7P0C024 238 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ADORA3P0DMS8 318 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RPS3P23396 243 aaKnown RBP eCLIP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CREMQ03060 361 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SIM2Q14190 667 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PTPRRQ15256 657 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PFKFB4Q16877 469 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ATP13A4Q4VNC1 1196 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 FASTKD1Q53R41 847 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DDI2Q5TDH0 399 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ANKS6Q68DC2 871 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CHST3Q7LGC8 479 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 OTOP1Q7RTM1 612 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 FAM178BQ8IXR5 827 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RTL3Q8N8U3 475 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF461Q8TAF7 563 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DYNC2LI1Q8TCX1 351 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TRPM4Q8TD43 1214 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC22A18Q96BI1 424 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TOX2Q96NM4 488 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 AGAP2Q99490 1192 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TTYH1Q9H313 450 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GFOD1Q9NXC2 390 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TREM2Q9NZC2 230 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SCP2D1Q9UJQ7 156 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ADAM28Q9UKQ2 775 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HCN2Q9UL51 889 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NR2E1Q9Y466 385 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DCAF8L1A6NGE4 600 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 SLC31A2O15432 143 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 PSMD3O43242 534 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 PLGP00747 810 aaPredicted RBP4.11□□□□□ -1.75
NEDD4-201ENST00000338963 PCCAP05165 728 aaPredicted RBP4.11□□□□□ -1.75
NEDD4-201ENST00000338963 GNAO1P09471 354 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 THRBP10828 461 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 IVDP26440 423 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 PSMB9P28065 219 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 CASP1P29466 404 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 TRHRP34981 398 aaPredicted RBP4.11□□□□□ -1.75
NEDD4-201ENST00000338963 PTPN5P54829 565 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 TAS2R60P59551 318 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 KIAA1024LP59773 190 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 TDGQ13569 410 aa4.11□□□□□ -1.75
NEDD4-201ENST00000338963 CEACAM7Q14002 265 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms