RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FZD5Q13467 585 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FGL2Q14314 439 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3GQ6DHY5 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3CQ6IPX1 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZYG11AQ6WRX3 759 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NAPRTQ6XQN6 538 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZCCHC23Q6ZST2 131 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CPLX4Q7Z7G2 160 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ISCA2Q86U28 154 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PHYKPLQ8IUZ5 450 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIM42Q8IWZ5 723 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3Q8IZP1 549 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SYNPOQ8N3V7 929 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RDH11Q8TC12 318 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 INPP5DQ92835 1189 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PTERQ96BW5 349 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LINGO1Q96FE5 620 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DERL2Q9GZP9 239 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ALG9Q9H6U8 611 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 POLMQ9NP87 494 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SLCO1B3Q9NPD5 702 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FGFR1OP2Q9NVK5 253 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MID2Q9UJV3 735 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 A0A1W2PQU0 124 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OR2AG2A6NM03 316 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CHURC1-FNTBB4DL54 471 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TSPAN12O95859 305 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PAK4O96013 591 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PCCBP05166 539 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FGF3P11487 239 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TMEM115Q12893 351 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 GAS6Q14393 721 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 WSCD2Q2TBF2 565 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CES4AQ5XG92 561 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KIAA1161Q6NSJ0 714 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIM67Q6ZTA4 783 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SYT13Q7L8C5 426 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIM74Q86UV6 250 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PPP1R14CQ8TAE6 165 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PANX3Q96QZ0 392 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SPATS2LQ9NUQ6 558 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIOO75962 3097 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SGTAO43765 313 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 AP2A2O94973 939 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FAM107AO95990 144 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KCNC1P48547 511 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TPMTP51580 245 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DGKEP52429 567 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SGCGQ13326 291 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 AGERQ15109 404 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TMEM31Q5JXX7 168 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PNCKQ6P2M8 343 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OTOAQ7RTW8 1153 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZBTB2Q8N680 514 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BEND7Q8N7W2 519 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RASGEF1AQ8N9B8 481 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LENG8Q96PV6 779 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 C1QTNF2Q9BXJ5 285 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PITPNM3Q9BZ71 974 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PREBQ9HCU5 417 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MBNL1Q9NR56 388 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TSR3Q9UJK0 312 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 IKZF3Q9UKT9 509 aa14.55□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ANKRD12Q6UB98 2062 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NDUFAB1O14561 156 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DLX3O60479 287 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MAT2AP31153 395 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CCR7P32248 378 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CTSCP53634 463 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ATP6V0D1P61421 351 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BST1Q10588 318 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.081e-6■■■□□ 15.1
CDK5RAP3-201ENST00000338399 OR4D1Q15615 310 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TMEM259Q4ZIN3 620 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ATG16L1Q676U5 607 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 HORMAD1Q86X24 394 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RAB3IL1Q8TBN0 382 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SLC17A9Q9BYT1 436 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TFB2MQ9H5Q4 396 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LATS2Q9NRM7 1088 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OXSMQ9NWU1 459 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 EBF1Q9UH73 591 aa14.54□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NPEPPSL1A6NEC2 478 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NEMP2A6NFY4 417 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CDC7O00311 574 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 STK25O00506 426 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KLF11O14901 512 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MAGEC1O60732 1142 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIM13O60858 407 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ACSL1P33121 698 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PPP2CBP62714 309 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PPP2CAP67775 309 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 STX3Q13277 289 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 IRF4Q15306 451 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ACSBG2Q5FVE4 666 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TMEM220Q6QAJ8 160 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms