RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZNF321PQ8N8H1 164 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 IRGQQ8WZA9 623 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 AURKBQ96GD4 344 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 NECAB3Q96P71 396 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DPYSL5Q9BPU6 564 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CCDC32Q9BV29 185 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 OSBPL5Q9H0X9 879 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MMP27Q9H306 513 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TCEAL2Q9H3H9 227 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CYP3A43Q9HB55 503 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 BCS1LQ9Y276 419 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FIS1Q9Y3D6 152 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADGRG1Q9Y653 693 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KIAA0100Q14667 2235 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MYO3BQ8WXR4 1341 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DICER1Q9UPY3 1922 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMLR1H3BR10 107 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FAM20BO75063 409 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRLRP16471 622 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 HTR7P34969 479 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 LUMP51884 338 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 HSD17B7P56937 341 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB32Q13637 225 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PKP1Q13835 747 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 BATFQ16520 125 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CLPPQ16740 277 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 AVPI1Q5T686 147 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SYT13Q7L8C5 426 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SH3RF3Q8TEJ3 882 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RASD2Q96D21 266 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RTKNQ9BST9 563 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PDP1Q9P0J1 537 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CTNND2Q9UQB3 1225 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GJA3Q9Y6H8 435 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 UMODL1Q5DID0 1318 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 POLR2AP24928 1970 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PDE8AO60658 829 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PCCBP05166 539 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CTPS1P17812 591 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC6A4P31645 630 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DRG2P55039 364 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMIM11AP58511 58 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 UBE2KP61086 200 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SULT2A1Q06520 285 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 EPHA7Q15375 998 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 WDR59Q6PJI9 974 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TFAP2DQ7Z6R9 452 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLCO6A1Q86UG4 719 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PLEKHM2Q8IWE5 1019 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF614Q8N883 585 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CD300LFQ8TDQ1 290 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MASTLQ96GX5 879 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TEFMQ96QE5 360 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ECSITQ9BQ95 431 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KAT8Q9H7Z6 458 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 POT1Q9NUX5 634 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CAMSAP1Q5T5Y3 1602 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CDH1P12830 882 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRKCHP24723 683 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SNCAP37840 140 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTSQ03393 145 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 EIF2B1Q14232 305 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ELP2Q6IA86 826 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KATNAL2Q8IYT4 538 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 LILRB4Q8NHJ6 448 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GOLGA2P5Q9HBQ8 144 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 UBE2TQ9NPD8 197 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 NANSQ9NR45 359 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PQJ5 194 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DDX3YO15523 660 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SOAT2O75908 522 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ASLP04424 464 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TAL1P17542 331 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CRATP43155 626 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 XRRA1Q6P2D8 792 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARL9Q6T311 187 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FAM198BQ6UWH4 519 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF431Q8TF32 576 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ASB11Q8WXH4 323 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MCCC1Q96RQ3 725 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 NUDT15Q9NV35 164 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PHF24Q9UPV7 400 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 URB1O60287 2271 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTCH1Q13635 1447 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 M0R129 80 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 DNAJA2O60884 412 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CCR4P51679 360 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NTRK2Q16620 822 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SPATS1Q496A3 300 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PPP1R15BQ5SWA1 713 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF565Q8N9K5 539 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KREMEN1Q96MU8 473 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 EPYCQ99645 322 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADI1Q9BV57 179 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CDADC1Q9BWV3 514 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms