RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PSMG1O95456 288 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 C1SP09871 688 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 NCF1P14598 390 aaPredicted RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 VIPR1P32241 457 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 SPINT3P49223 89 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 NUDT2P50583 147 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 HK3P52790 923 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 SEMG2Q02383 582 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TBL3Q12788 808 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 TGFBIQ15582 683 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TMC5Q6UXY8 1006 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 RIPOR1Q6ZS17 1223 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 LARP4Q71RC2 724 aaKnown RBP eCLIP16.78■□□□□ 0.288e-13■■■■□ 22.2
SSR4-201ENST00000320857 CYB5D2Q8WUJ1 264 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TWIST2Q8WVJ9 160 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 LRIG1Q96JA1 1093 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 PANX3Q96QZ0 392 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 COPS8Q99627 209 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 EFCAB1Q9HAE3 211 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 EBF2Q9HAK2 575 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 PFDN4Q9NQP4 134 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 SPATS2LQ9NUQ6 558 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 KLHL42Q9P2K6 505 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 PCTPQ9UKL6 214 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TNPO3Q9Y5L0 923 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 DNAJC15Q9Y5T4 150 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 ZNF106Q9H2Y7 1883 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 TSPAN11A1L157 253 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TTC34A8MYJ7 566 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 H0Y3Z8 333 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 TRIM24O15164 1050 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 RAD51BO15315 384 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 VPS4BO75351 444 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 ANP32DO95626 131 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 CISD3P0C7P0 127 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 ITGB6P18564 788 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 ACTR3P61158 418 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 EML3Q32P44 896 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 PREPLQ4J6C6 727 aaPredicted RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 GPRC6AQ5T6X5 926 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 PGM2L1Q6PCE3 622 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 VN1R2Q8NFZ6 395 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 LKAAEAR1Q8TD35 194 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 HCAR2Q8TDS4 363 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 HGH1Q9BTY7 390 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 FAM126AQ9BYI3 521 aaPredicted RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 RAD18Q9NS91 495 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 CDH22Q9UJ99 828 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 PRPF19Q9UMS4 504 aaKnown RBP16.78■□□□□ 0.28
SSR4-201ENST00000320857 WASF2Q9Y6W5 498 aa16.78■□□□□ 0.28
SSR4-201ENST00000320857 CHD9Q3L8U1 2897 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 PSMD12O00232 456 aaPredicted RBP16.77■□□□□ 0.28
SSR4-201ENST00000320857 PPP6CO00743 305 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 ESRRBO95718 433 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 CBSLP0DN79 551 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 CBSP35520 551 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 AGTR2P50052 363 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 STX1BP61266 288 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 CCDC6Q16204 474 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 RBBP7Q16576 425 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 ARSIQ5FYB1 569 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 CLDN19Q8N6F1 224 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 SORCS1Q8WY21 1168 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 RCN3Q96D15 328 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 LRRC3BQ96PB8 259 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 SERPINI1Q99574 410 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 CDCA3Q99618 268 aaPredicted RBP16.77■□□□□ 0.28
SSR4-201ENST00000320857 ZNF576Q9H609 170 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 DZANK1Q9NVP4 752 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 KCTD5Q9NXV2 234 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 STOML1Q9UBI4 398 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 IL36AQ9UHA7 158 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 SLC27A6Q9Y2P4 619 aa16.77■□□□□ 0.28
SSR4-201ENST00000320857 SCN8AQ9UQD0 1980 aa16.77■□□□□ 0.27
SSR4-201ENST00000320857 EPOPA6NHQ4 379 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 PIP5K1BO14986 540 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 LEFTY1O75610 366 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 KRT36O76013 467 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 NFATC1O95644 943 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 CHEK2O96017 543 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 GNAZP19086 355 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 XPAP23025 273 aaPredicted RBP16.76■□□□□ 0.27
SSR4-201ENST00000320857 PKNOX1P55347 436 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 IRX1P78414 480 aaPredicted RBP16.76■□□□□ 0.27
SSR4-201ENST00000320857 STX5Q13190 355 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 ART3Q13508 389 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 FASTKQ14296 549 aaKnown RBP16.76■□□□□ 0.27
SSR4-201ENST00000320857 RCN1Q15293 331 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 PCBP2Q15366 365 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSR4-201ENST00000320857 PPP1R3AQ16821 1122 aa16.76■□□□□ 0.27
SSR4-201ENST00000320857 ATP13A5Q4VNC0 1218 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms