RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 DENND6BQ8NEG7 585 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 GDAP1Q8TB36 358 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 SLC17A9Q9BYT1 436 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 SLC13A1Q9BZW2 595 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 GPAMQ9HCL2 828 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 KLHL42Q9P2K6 505 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 OAS3Q9Y6K5 1087 aaKnown RBP13.91□□□□□ -0.18
MSRA-201ENST00000317173 NUMA1Q14980 2115 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 DOCK9Q9BZ29 2069 aa13.91□□□□□ -0.18
MSRA-201ENST00000317173 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 C10orf142B7Z368 130 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 E5RI56 91 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 PHGDHO43175 533 aaKnown RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 CHN1P15882 459 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 MSH3P20585 1137 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 RPA3P35244 121 aaPredicted RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 NUDT1P36639 197 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 ATP1A2P50993 1020 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 CDKN2DP55273 166 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 WSCD2Q2TBF2 565 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 PPM1JQ5JR12 505 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 PNCKQ6P2M8 343 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 DENND1AQ8TEH3 1009 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 CENPTQ96BT3 561 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 UBXN10Q96LJ8 280 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 LENG8Q96PV6 779 aaPredicted RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 LATS2Q9NRM7 1088 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 INTS9Q9NV88 658 aaKnown RBP13.9□□□□□ -0.18
MSRA-201ENST00000317173 MED16Q9Y2X0 877 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 PLLPQ9Y342 182 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 DMDP11532 3685 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 CFAP54Q96N23 3096 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 FRYLO94915 3013 aa13.9□□□□□ -0.18
MSRA-201ENST00000317173 CCDC189A1A4V9 331 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 MAGEC1O60732 1142 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 KLHL2O95198 593 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 SEMA4FO95754 770 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 APOA4P06727 396 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 CHRM3P20309 590 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 ACSL1P33121 698 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 B4GALNT1Q00973 533 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 MPP2Q14168 576 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 FAM83EQ2M2I3 478 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 CCDC153Q494R4 210 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 AGAP9Q5VTM2 703 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 FAM124AQ86V42 546 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 TP53I13Q8NBR0 393 aaPredicted RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 COX14Q96I36 57 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 HIC2Q96JB3 615 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 ZNF514Q96K75 400 aaPredicted RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 SPACA7Q96KW9 195 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 TRMT6Q9UJA5 497 aaKnown RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 MID2Q9UJV3 735 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 CNOT6Q9ULM6 557 aaKnown RBP13.9□□□□□ -0.19
MSRA-201ENST00000317173 DHRS7Q9Y394 339 aa13.9□□□□□ -0.19
MSRA-201ENST00000317173 GPR89AB7ZAQ6 455 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 KPNA5O15131 536 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 LATO43561 262 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 VEGFDO43915 354 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 NIPSNAP2O75323 286 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 FTH1P02794 183 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 GSTM1P09488 218 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 LTA4HP09960 611 aaKnown RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 GPR89BP0CG08 455 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 CD6P30203 668 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TRIM23P36406 574 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 ETV4P43268 484 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 CCR5P51681 352 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TIAL1Q01085 375 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSRA-201ENST00000317173 GSTM4Q03013 218 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 FGL2Q14314 439 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 IRF4Q15306 451 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 KLC3Q6P597 504 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 CDHR3Q6ZTQ4 885 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 CENPLQ8N0S6 344 aaPredicted RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 NKAPQ8N5F7 415 aaKnown RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 ANKRD42Q8N9B4 389 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 GPR21Q99679 349 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 TPSD1Q9BZJ3 242 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 PCED1AQ9H1Q7 454 aa13.89□□□□□ -0.19
MSRA-201ENST00000317173 SPATS2LQ9NUQ6 558 aaKnown RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 WSB2Q9NYS7 404 aaPredicted RBP13.89□□□□□ -0.19
MSRA-201ENST00000317173 PCDHGA5Q9Y5G8 931 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms