RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 STX7O15400 261 aaKnown RBP25.05■■□□□ 1.6
HOXB3-201ENST00000311626 STT3AP46977 705 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 CDK9P50750 372 aaKnown RBP25.05■■□□□ 1.6
HOXB3-201ENST00000311626 RNF219Q5W0B1 726 aaPredicted RBP25.05■■□□□ 1.6
HOXB3-201ENST00000311626 IL27RAQ6UWB1 636 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 MFSD2AQ8NA29 543 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 OR56A4Q8NGH8 313 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 C9orf16Q9BUW7 83 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 TRIM54Q9BYV2 358 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 ANAPC2Q9UJX6 822 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 KDELR3O43731 214 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 RSL1D1O76021 490 aaKnown RBP25.05■■□□□ 1.6
HOXB3-201ENST00000311626 GUCA1CO95843 209 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 CAPN1P07384 714 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 CR2P20023 1033 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 ATP5C1P36542 298 aaKnown RBP25.05■■□□□ 1.6
HOXB3-201ENST00000311626 GALK1P51570 392 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 SLC36A3Q495N2 470 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 ALG1LQ6GMV1 187 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 OGFOD2Q6N063 350 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 OR6K2Q8NGY2 324 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 FADS3Q9Y5Q0 445 aa25.05■■□□□ 1.6
HOXB3-201ENST00000311626 ANKRD66B4E2M5 251 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 EEDO75530 441 aaKnown RBP25.04■■□□□ 1.6
HOXB3-201ENST00000311626 G6PDP11413 515 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 MYF6P23409 242 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 SH3BGRP55822 239 aaPredicted RBP25.04■■□□□ 1.6
HOXB3-201ENST00000311626 TWF1Q12792 350 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 GPR17Q13304 367 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 TGFBIQ15582 683 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 TMEM214Q6NUQ4 689 aaKnown RBP25.04■■□□□ 1.6
HOXB3-201ENST00000311626 RGMBQ6NW40 437 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 GAB3Q8WWW8 586 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 SUN2Q9UH99 717 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 LEF1Q9UJU2 399 aaPredicted RBP25.04■■□□□ 1.6
HOXB3-201ENST00000311626 DNMT3LQ9UJW3 386 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 ANKRD36A6QL64 1941 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 OR6C75A6NL08 312 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 VPS4BO75351 444 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 VARSP26640 1264 aaKnown RBP25.04■■□□□ 1.6
HOXB3-201ENST00000311626 RFC2P35250 354 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 MAPK10P53779 464 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 FCGRTP55899 365 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 METTL6Q8TCB7 284 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 DTNBP1Q96EV8 351 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 THEGQ9P2T0 379 aa25.04■■□□□ 1.6
HOXB3-201ENST00000311626 LAMA3Q16787 3333 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 RASAL1O95294 804 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 F11P03951 625 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ALPIP09923 528 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 GGT5P36269 586 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ACLYP53396 1101 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ERVK-8P63133 956 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 FAM189BP81408 668 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ATXN7L2Q5T6C5 722 aaPredicted RBP25.03■■□□□ 1.6
HOXB3-201ENST00000311626 FUT10Q6P4F1 479 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 CHID1Q9BWS9 393 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 SMPD4Q9NXE4 827 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 STX16O14662 325 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 MLYCDO95822 493 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ZDHHC11BP0C7U3 371 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 CORO1AP31146 461 aaKnown RBP25.03■■□□□ 1.6
HOXB3-201ENST00000311626 CLCN2P51788 898 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 ATP6AP1LQ52LC2 224 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 GPR141Q7Z602 305 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 SPRED1Q7Z699 444 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 HM13Q8TCT9 377 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 BCL7CQ8WUZ0 217 aaPredicted RBP25.03■■□□□ 1.6
HOXB3-201ENST00000311626 EID2BQ96D98 161 aa25.03■■□□□ 1.6
HOXB3-201ENST00000311626 TMEM88BA6NKF7 163 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 COCHO43405 550 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 B4GAT1O43505 415 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 ALDH2P05091 517 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 RPLP2P05387 115 aaKnown RBP25.02■■□□□ 1.6
HOXB3-201ENST00000311626 SLC11A2P49281 568 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 CDH4P55283 916 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 RIMKLBQ9ULI2 386 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 PHF24Q9UPV7 400 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 POLR3HQ9Y535 204 aaPredicted RBP25.02■■□□□ 1.6
HOXB3-201ENST00000311626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.02■■□□□ 1.6
HOXB3-201ENST00000311626 A8MX80 341 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 BMP10O95393 424 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 ZNF177Q13360 481 aaPredicted RBP25.02■■□□□ 1.6
HOXB3-201ENST00000311626 BTG3Q14201 252 aaPredicted RBP25.02■■□□□ 1.6
HOXB3-201ENST00000311626 GLYATQ6IB77 296 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 BRINP2Q9C0B6 783 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 HACD3Q9P035 362 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 PCDHB9Q9Y5E1 797 aa25.02■■□□□ 1.6
HOXB3-201ENST00000311626 FFAR3O14843 346 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 GPR42O15529 346 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 KLK8O60259 260 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 GPIP06744 558 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 GDF5P43026 501 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 ARF5P84085 180 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 PMS2P3Q13401 168 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 NR6A1Q15406 480 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 CYBRD1Q53TN4 286 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 SAPCD2Q86UD0 394 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 ZBTB46Q86UZ6 589 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 DHRSXQ8N5I4 330 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms