RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RIPK2O43353 540 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MTRF1O75570 445 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CLPTM1O96005 669 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PLGP00747 810 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TSPAN19P0C672 248 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TFEBP19484 476 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MGAT1P26572 445 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MC4RP32245 332 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PRKCZQ05513 592 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MZT1Q08AG7 82 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FCHO2Q0JRZ9 810 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GBX1Q14549 363 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 HECTD2Q5U5R9 776 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MZT2BQ6NZ67 158 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LLGL2Q6P1M3 1020 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MSANTD2Q6P1R3 559 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 USP49Q70CQ1 688 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NANOGNBQ7Z5D8 188 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 C7orf61Q8IZ16 206 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DBF4BQ8NFT6 615 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 AARSD1Q9BTE6 412 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NUAK2Q9H093 628 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CLDND1Q9NY35 253 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TSR3Q9UJK0 312 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PAIP2BQ9ULR5 123 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ACACAQ13085 2346 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 STRCQ7RTU9 1775 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 AP5Z1O43299 807 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SUV39H1O43463 412 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 AP2A2O94973 939 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PRAMEF1O95521 474 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 OAS1P00973 400 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SERPINA6P08185 405 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ITGA2BP08514 1039 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GIMD1P0DJR0 217 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 IL7RP16871 459 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PEX19P40855 299 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MNDAP41218 407 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SLC9A5Q14940 896 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SEC23BQ15437 767 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DGUOKQ16854 277 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ALFQ53S48 1182 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FAM91A1Q658Y4 838 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SH3RF1Q7Z6J0 888 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RBM23Q86U06 439 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FAM228AQ86W67 206 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GATAD2AQ86YP4 633 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CREG2Q8IUH2 290 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ARHGAP12Q8IWW6 846 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RBM12BQ8IXT5 1001 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CFAP206Q8IYR0 622 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RTL3Q8N8U3 475 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DAZLQ92904 295 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZIM3Q96PE6 472 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SNRNP25Q9BV90 132 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 C1QTNF1Q9BXJ1 281 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CDHR5Q9HBB8 845 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TRMT13Q9NUP7 481 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 COMMD9Q9P000 198 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PSMD13Q9UNM6 376 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GTF2A1LQ9UNN4 478 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF451Q9Y4E5 1061 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FER1L6Q2WGJ9 1857 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NR5A2O00482 541 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TIPRLO75663 272 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 HOXC13P31276 330 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RPL4P36578 427 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MAPK12P53778 367 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 VBP1P61758 197 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RPS15P62841 145 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF311Q5JNZ3 666 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TREML2Q5T2D2 321 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CCNYL2Q5T2Q4 361 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 METTL2BQ6P1Q9 378 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 KBTBD2Q8IY47 623 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GPR65Q8IYL9 337 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZDHHC14Q8IZN3 488 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EFCAB3Q8N7B9 438 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EXOC2Q96KP1 924 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 C8orf48Q96LL4 319 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TM6SF2Q9BZW4 377 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FZD8Q9H461 694 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC4CQ9HCJ2 640 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FBXL12Q9NXK8 326 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ING3Q9NXR8 418 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NAALADL1Q9UQQ1 740 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LRCH1Q9Y2L9 728 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NHSL1Q5SYE7 1610 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FAM221BA6H8Z2 402 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FADS2P1A8MWK0 482 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ACOT7O00154 380 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TOR1BO14657 336 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TP53I11O14683 189 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LIN7AO14910 233 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SLC28A2O43868 658 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ALDH4A1P30038 563 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LRPAP1P30533 357 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SHMT2P34897 504 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 COX10Q12887 443 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC14Q15048 493 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms