RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SLC44A4Q53GD3 710 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 AGAP9Q5VTM2 703 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF776Q68DI1 518 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZYG11AQ6WRX3 759 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NAPRTQ6XQN6 538 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MACC1Q6ZN28 852 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CCDC91Q7Z6B0 441 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PIGWQ7Z7B1 504 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NRSN1Q8IZ57 195 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 OR6Y1Q8NGX8 325 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 DTX3LQ8TDB6 740 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 FAM3CQ92520 227 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ULK4Q96C45 1275 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 AP2M1Q96CW1 435 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TSNARE1Q96NA8 513 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ELAC2Q9BQ52 826 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MRPL57Q9BQC6 102 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CLPBQ9H078 707 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 GNPTGQ9UJJ9 305 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PCDHB1Q9Y5F3 818 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 COMMD10Q9Y6G5 202 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NEMP2A6NFY4 417 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 E5RI56 91 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 K7ESM1 405 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NEMP1O14524 444 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ITM2AO43736 263 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SGTAO43765 313 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 DLX3O60479 287 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RNASEH1O60930 286 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SNNO75324 88 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 APOA4P06727 396 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PYGLP06737 847 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MYL2P10916 166 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NEFHP12036 1026 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CHRM3P20309 590 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 C5AR1P21730 350 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NSG1P42857 185 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MRPS21P82921 87 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 OCRLQ01968 901 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ACAP2Q15057 778 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 OR4D1Q15615 310 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF284Q2VY69 593 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 C2CD3Q4AC94 2353 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PTRHD1Q6GMV3 140 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SDE2Q6IQ49 451 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TMEM92Q6UXU6 159 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ISCA2Q86U28 154 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CPNE9Q8IYJ1 553 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 HDDC3Q8N4P3 179 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 FBXL6Q8N531 539 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 DDHD1Q8NEL9 900 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RPLP0P6Q8NHW5 317 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RAB3IL1Q8TBN0 382 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RDH11Q8TC12 318 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CXorf40AQ8TE69 158 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 EEF1AKMT1Q8WVE0 214 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 FAM131CQ96AQ9 280 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 NUS1Q96E22 293 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MOCOSQ96EN8 888 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SGF29Q96ES7 293 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TTC1Q99614 292 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 COPS8Q99627 209 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZSCAN5AQ9BUG6 496 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TSSK1BQ9BXA7 367 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PITPNM3Q9BZ71 974 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CDH19Q9H159 772 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MRPL46Q9H2W6 279 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ALG9Q9H6U8 611 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SARS2Q9NP81 518 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 OXSMQ9NWU1 459 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TRMT6Q9UJA5 497 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CNOT6Q9ULM6 557 aaKnown RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 DHRS7Q9Y394 339 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ANKRD65E5RJM6 399 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 AP1G1O43747 822 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 SNX3O60493 162 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 LYPLA1O75608 230 aaPredicted RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 RNASEH2AO75792 299 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 SLC25A14O95258 325 aaPredicted RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 TRIM16O95361 564 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 SERPINE1P05121 402 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 RALBP11234 206 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 OVGP1Q12889 678 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 STARD3Q14849 445 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 MLF2Q15773 248 aaPredicted RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 DET1Q7L5Y6 550 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 TRMT11Q7Z4G4 463 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 TMPRSS6Q8IU80 811 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 RAVER1Q8IY67 606 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 KDF1Q8NAX2 398 aaPredicted RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 FUBP1Q96AE4 644 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms