RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZNF548Q8NEK5 533 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 TNIP2Q8NFZ5 429 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 EFHD2Q96C19 240 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 BCL7BQ9BQE9 202 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SLC25A23Q9BV35 468 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TTLL2Q9BWV7 592 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CFHR5Q9BXR6 569 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TASP1Q9H6P5 420 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CAAP1Q9H8G2 361 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SACM1LQ9NTJ5 587 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 FAM118AQ9NWS6 357 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 FBXL12Q9NXK8 326 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ASIC5Q9NY37 505 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SMPD3Q9NY59 655 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 SELENONQ9NZV5 590 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 OR12D3Q9UGF7 316 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SUN2Q9UH99 717 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CROTQ9UKG9 612 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PCDHGA10Q9Y5H3 936 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PTPRSQ13332 1948 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ANKRD12Q6UB98 2062 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 A0A0J9YYE9 177 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 A0A0U1RQF3 1178 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 E2F3O00716 465 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TXNDC9O14530 226 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SEC14L5O43304 696 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PMPCBO75439 489 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 WBP4O75554 376 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 CNTN5O94779 1100 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ARHGEF15O94989 841 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 RHOQP17081 205 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 RYKP34925 604 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ALDH3A2P51648 485 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ARSFP54793 590 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TPI1P60174 286 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 IGBP1P78318 339 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 BNIP2Q12982 314 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PRPSAP1Q14558 356 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 IRF3Q14653 427 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CYTH1Q15438 398 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 VPS26BQ4G0F5 336 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ZC3H12BQ5HYM0 836 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 ZBTB49Q6ZSB9 765 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 RAB44Q7Z6P3 723 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 REM2Q8IYK8 340 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PGBD3Q8N328 593 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ATP6V0D2Q8N8Y2 350 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 FGF11Q92914 225 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TXNDC15Q96J42 360 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CWH43Q9H720 699 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SIAEQ9HAT2 523 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 C20orf96Q9NUD7 363 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 MIOSQ9NXC5 875 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CCDC167Q9P0B6 97 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 UGT2A1Q9Y4X1 527 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 MYBPHLA2RUH7 354 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ARL5CA6NH57 179 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 M0R082 166 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 MUSKO15146 869 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 TREHO43280 583 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 XYLBO75191 536 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 INMTO95050 263 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 KCNH1O95259 989 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ATXN8OSP0DMR3 200 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ITGAMP11215 1152 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 TTKP33981 857 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 GGT5P36269 586 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 RPS9P46781 194 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 CLK3P49761 638 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 EEFSECP57772 596 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 EMX1Q04741 257 aaPredicted RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 CAPRIN1Q14444 709 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 MAPRE2Q15555 327 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 RBM48Q5RL73 367 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 GJC2Q5T442 439 aaPredicted RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 TMTC4Q5T4D3 741 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CES5AQ6NT32 575 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 PRMT9Q6P2P2 845 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SCYL2Q6P3W7 929 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 R3HCC1LQ7Z5L2 792 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 TLK2Q86UE8 772 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ZFAND4Q86XD8 727 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 NDNFQ8TB73 568 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 MIPOL1Q8TD10 442 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CALML6Q8TD86 181 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SREK1Q8WXA9 508 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 OVCA2Q8WZ82 227 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 POP5Q969H6 163 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 OSMRQ99650 979 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 TFB2MQ9H5Q4 396 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 CATSPERBQ9H7T0 1116 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 FANCEQ9HB96 536 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 LATS2Q9NRM7 1088 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 DOLKQ9UPQ8 538 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms