RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 UGT1A5P35504 534 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 PTDSS1P48651 473 aaKnown RBP19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SPINT3P49223 89 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 DCDC1P59894 354 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 STX1BP61266 288 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 FASTKQ14296 549 aaKnown RBP19.18■□□□□ 0.66
HOXC4-201ENST00000303406 PPP1R3AQ16821 1122 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 OGFOD2Q6N063 350 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SBSNQ6UWP8 590 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 HACD2Q6Y1H2 254 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 BNC2Q6ZN30 1099 aaPredicted RBP19.18■□□□□ 0.66
HOXC4-201ENST00000303406 FRA10AC1Q70Z53 315 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 CHST14Q8NCH0 376 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 PBXIP1Q96AQ6 731 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SLC25A23Q9BV35 468 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 FAM126AQ9BYI3 521 aaPredicted RBP19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SMOXQ9NWM0 555 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 DKK3Q9UBP4 350 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 B4GALT6Q9UBX8 382 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SARDHQ9UL12 918 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SLC27A6Q9Y2P4 619 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 LRRC42Q9Y546 428 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 E2F3O00716 465 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 PIP5K1BO14986 540 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 ARHGEF15O94989 841 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 CHEK2O96017 543 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 CISD3P0C7P0 127 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 PRR35P0CG20 571 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 VIPR1P32241 457 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 VHLP40337 213 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 ERVK-21P61565 698 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 GRIK2Q13002 908 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 ART3Q13508 389 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 DHCR24Q15392 516 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 CDKL4Q5MAI5 379 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 TMEM215Q68D42 235 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 HMGCLL1Q8TB92 370 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 LKAAEAR1Q8TD35 194 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 OSCP1Q8WVF1 389 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 MARK4Q96L34 752 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 KLHL32Q96NJ5 620 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 COPS8Q99627 209 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 HGH1Q9BTY7 390 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 MRPL1Q9BYD6 325 aaKnown RBP19.17■□□□□ 0.66
HOXC4-201ENST00000303406 AKTIPQ9H8T0 292 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 RDH14Q9HBH5 336 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 MRPL40Q9NQ50 206 aaKnown RBP19.17■□□□□ 0.66
HOXC4-201ENST00000303406 KCTD5Q9NXV2 234 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 POMPQ9Y244 141 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 WASF2Q9Y6W5 498 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 PLXNB3Q9ULL4 1909 aa19.17■□□□□ 0.66
HOXC4-201ENST00000303406 BBIP1A8MTZ0 92 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 PPP6CO00743 305 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 GIPC1O14908 333 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 TBX10O75333 385 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 CRCPO75575 148 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 ADH1CP00326 375 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 BMP1P13497 986 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 ENO3P13929 434 aaPredicted RBP19.16■□□□□ 0.66
HOXC4-201ENST00000303406 LBPP18428 481 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 PSMD8P48556 350 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 GPM6BQ13491 265 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 GSTA3Q16772 222 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 GEN1Q17RS7 908 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 TTC23LQ6PF05 361 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 GPRIN3Q6ZVF9 776 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 SPATA19Q7Z5L4 167 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 RAVER1Q8IY67 606 aaKnown RBP19.16■□□□□ 0.66
HOXC4-201ENST00000303406 UBTD2Q8WUN7 234 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 C3orf30Q96M34 536 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 SEMA4BQ9NPR2 832 aaPredicted RBP19.16■□□□□ 0.66
HOXC4-201ENST00000303406 TMEM45AQ9NWC5 275 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 BCAP29Q9UHQ4 241 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 MYOFQ9NZM1 2061 aa19.16■□□□□ 0.66
HOXC4-201ENST00000303406 FFAR2O15552 330 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 BNIP3LO60238 219 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 MATN4O95460 622 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 CYP17A1P05093 508 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 SNRPB2P08579 225 aaKnown RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 ADH5P11766 374 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 CD1EP15812 388 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 AGTR2P50052 363 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 FOXA1P55317 472 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 ARHGEF7Q14155 803 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 XKR7Q5GH72 579 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 PIGGQ5H8A4 983 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 GK5Q6ZS86 529 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 SYVN1Q86TM6 617 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 SMG7Q92540 1137 aaKnown RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 CCDC97Q96F63 343 aaPredicted RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 TUBB1Q9H4B7 451 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 WDR41Q9HAD4 459 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 PIDD1Q9HB75 910 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 S100A14Q9HCY8 104 aa19.15■□□□□ 0.66
HOXC4-201ENST00000303406 DUS2Q9NX74 493 aaKnown RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 PTBP2Q9UKA9 531 aaKnown RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 NCF1BA6NI72 391 aaPredicted RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 NCF1CA8MVU1 366 aaPredicted RBP19.15■□□□□ 0.66
HOXC4-201ENST00000303406 UPK3BL1B0FP48 263 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms