RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 TOGARAM1Q9Y4F4 1720 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OR14I1A6ND48 311 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TTLL13PA6NNM8 815 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PER2O15055 1255 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CBX6O95503 412 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PRG2P13727 222 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SLC11A2P49281 568 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PTSQ03393 145 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 UBXN11Q5T124 520 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 METTL7BQ6UX53 244 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MON1BQ7L1V2 547 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ANGPTL6Q8NI99 470 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CXorf40AQ8TE69 158 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OTUB2Q96DC9 234 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FAM126AQ9BYI3 521 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PORCNQ9H237 461 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CISHQ9NSE2 258 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CRLS1Q9UJA2 301 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 BCL9O00512 1426 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FGF19O95750 216 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 NDUFB10O96000 172 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 DHRS4L1P0CG22 281 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CBSLP0DN79 551 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CBSP35520 551 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OMPP47874 163 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF404Q494X3 552 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GXYLT1Q4G148 440 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 LCN8Q6JVE9 175 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OGFOD2Q6N063 350 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CHTF18Q8WVB6 975 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF354BQ96LW1 612 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 LRRC4CQ9HCJ2 640 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SCN1AP35498 2009 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ARL6IP5O75915 188 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RSL1D1O76021 490 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RASAL1O95294 804 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FTH1P02794 183 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ACPPP15309 386 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 JUNBP17275 347 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CYP2F1P24903 491 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PTPN3P26045 913 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PSMB9P28065 219 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RARRES1P49788 294 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SULT1E1P49888 294 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TPTEP56180 551 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FMO1Q01740 532 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FADDQ13158 208 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 HMGN3Q15651 99 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FIP1L1Q6UN15 594 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 NAPRTQ6XQN6 538 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SLCO6A1Q86UG4 719 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM17Q86X19 198 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SDR16C5Q8N3Y7 309 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GALNT4Q8N4A0 578 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TTLL6Q8N841 843 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 LPCAT1Q8NF37 534 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MND1Q9BWT6 205 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CRISPLD1Q9H336 500 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RAVER2Q9HCJ3 691 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MYNNQ9NPC7 610 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ARHGEF4Q9NR80 690 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CHST12Q9NRB3 414 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TAS2R8Q9NYW2 309 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FKBPLQ9UIM3 349 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PCDHGB2Q9Y5G2 931 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RIMBP3CA6NJZ7 1639 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RIMBP3BA6NNM3 1639 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RIMBP3Q9UFD9 1639 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 KRBOX1C9JBD0 128 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TYROBPO43914 113 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GKP32189 559 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CCR1P32246 355 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A5P35504 534 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GSSP48637 474 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PPP5CP53041 499 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RAB4BP61018 213 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ERVK-8P63133 956 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CTC1Q2NKJ3 1217 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PARP15Q460N3 678 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 VSTM1Q6UX27 236 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ITIH5Q86UX2 942 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MMAAQ8IVH4 418 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 POC1BQ8TC44 478 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TTC9Q92623 222 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SMARCD1Q96GM5 515 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 IFT27Q9BW83 186 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OSGEPL1Q9H4B0 414 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 DCXO43602 365 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CNTN5O94779 1100 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OAZ2O95190 189 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CCNDBP1O95273 360 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PIGNO95427 931 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 IFNA6P05013 189 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ITGA4P13612 1032 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CASP1P29466 404 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 USP46P62068 366 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ABHD18Q0P651 414 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 BAMBIQ13145 260 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZBTB6Q15916 424 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms