RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ANKRD12Q6UB98 2062 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 CCDC189A1A4V9 331 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SYCE1LA8MT33 242 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SOX1O00570 391 aaPredicted RBP22.55■■□□□ 1.2
PTX3-201ENST00000295927 C6P13671 934 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 GFAPP14136 432 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ATP1B2P14415 290 aaPredicted RBP22.55■■□□□ 1.2
PTX3-201ENST00000295927 RGS4P49798 205 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 HERVK_113P63132 956 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 CST6Q15828 149 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ACSBG2Q5FVE4 666 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 PIP5KL1Q5T9C9 394 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 RPS27LQ71UM5 84 aaKnown RBP22.55■■□□□ 1.2
PTX3-201ENST00000295927 CACUL1Q86Y37 369 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SLC44A3Q8N4M1 653 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 DDHD1Q8NEL9 900 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 BTN2A2Q8WVV5 523 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 RAB7BQ96AH8 199 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 VPS35Q96QK1 796 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ERVK-6Q9BXR3 956 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 MID1O15344 667 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 SYNCRIPO60506 623 aaKnown RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 RECQL5O94762 991 aaPredicted RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 EGFP01133 1207 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 DGKAP23743 735 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 DRD3P35462 400 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 RPL14P50914 215 aaKnown RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 ZBTB16Q05516 673 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 SMAD4Q13485 552 aaKnown RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 PON2Q15165 354 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 CCDC85BQ15834 202 aaPredicted RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 KHDC1Q4VXA5 237 aaKnown RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 C2orf27AQ580R0 203 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 FRMD7Q6ZUT3 714 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 GSTO2Q9H4Y5 243 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 UBE2ZQ9H832 354 aaPredicted RBP22.54■■□□□ 1.2
PTX3-201ENST00000295927 HEBP1Q9NRV9 189 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 FADS3Q9Y5Q0 445 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 PIAS3Q9Y6X2 628 aa22.54■■□□□ 1.2
PTX3-201ENST00000295927 MAGEC1O60732 1142 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 RNASEH1O60930 286 aaKnown RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 SNUPNO95149 360 aaKnown RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 UNC50Q53HI1 259 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 RAB44Q7Z6P3 723 aaPredicted RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 ALYREFQ86V81 257 aaKnown RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 RALGPS2Q86X27 583 aaPredicted RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 GPSM1Q86YR5 675 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 FBXO39Q8N4B4 442 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 AADATQ8N5Z0 425 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 GLYATL1Q969I3 302 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 STN1Q9H668 368 aaKnown RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 DNAJC28Q9NX36 388 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 KCTD5Q9NXV2 234 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 ZFP69BQ9UJL9 534 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 CFAP99D6REC4 459 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 LZTS3O60299 673 aaPredicted RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 SUPT7LO94864 414 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 MSH3P20585 1137 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 NTSR1P30989 418 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 IDH3AP50213 366 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 CREB5Q02930 508 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 TTLL9Q3SXZ7 439 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 ZNF648Q5T619 568 aaPredicted RBP22.53■■□□□ 1.2
PTX3-201ENST00000295927 VWA5B1Q5TIE3 1220 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 MYO1HQ8N1T3 1032 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 NUS1Q96E22 293 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 RILPQ96NA2 401 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 COG4Q9H9E3 785 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 KLHL42Q9P2K6 505 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 SLC12A4Q9UP95 1085 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 F5P12259 2224 aa22.53■■□□□ 1.2
PTX3-201ENST00000295927 SIX3O95343 332 aaPredicted RBP22.52■■□□□ 1.2
PTX3-201ENST00000295927 ADH1BP00325 375 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 CCR7P32248 378 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 HK3P52790 923 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 BNIP1Q12981 228 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 TMEM196Q5HYL7 178 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 LDLRAP1Q5SW96 308 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 ZNF765Q7L2R6 523 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 CLNKQ7Z7G1 428 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 PELI3Q8N2H9 469 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 CXorf40AQ8TE69 158 aa22.52■■□□□ 1.2
PTX3-201ENST00000295927 LRRC14BA6NHZ5 514 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 MATN2O00339 956 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 SGTAO43765 313 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 KLK8O60259 260 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 SCTRP47872 440 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 HK2P52789 917 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 CRY1Q16526 586 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 KIAA1211LQ6NV74 962 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 LRCH3Q96II8 777 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 GABRG3Q99928 467 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 TRMOQ9BU70 441 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 C8orf33Q9H7E9 229 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 EML4Q9HC35 981 aaKnown RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 MYO10Q9HD67 2058 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 NCF1BA6NI72 391 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 NCF1CA8MVU1 366 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 INPP4BO15327 924 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms