RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ARSIQ5FYB1 569 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 CYP20A1Q6UW02 462 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 NPAS4Q8IUM7 802 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 SPPL2BQ8TCT7 592 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 PLEKHG4BQ96PX9 1271 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 SIKE1Q9BRV8 207 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 AMBNQ9NP70 447 aa4.74□□□□□ -1.65
UBR1-201ENST00000290650 LEF1Q9UJU2 399 aaPredicted RBP4.74□□□□□ -1.65
UBR1-201ENST00000290650 DEAF1O75398 565 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 CLDN11O75508 207 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 BCL10O95999 233 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CCNFP41002 786 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 RAD23AP54725 363 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PRKCQQ04759 706 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CNTN1Q12860 1018 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 RABL3Q5HYI8 236 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PSRC1Q6PGN9 363 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 ASRGL1Q7L266 308 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PARGQ86W56 976 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CPSF7Q8N684 471 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 OR5AK3PQ8NH89 298 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 VMP1Q96GC9 406 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 FERD3LQ96RJ6 166 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 OLFM1Q99784 485 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 C9orf16Q9BUW7 83 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 H2AFY2Q9P0M6 372 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 RGS17Q9UGC6 210 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 COL5A3P25940 1745 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 FOXD2O60548 495 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 FADS2O95864 444 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 C8AP07357 584 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PROZP22891 400 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CD68P34810 354 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 MRPS15P82914 257 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 EPS8Q12929 822 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ACAP2Q15057 778 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CHRNA6Q15825 494 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 DDI2Q5TDH0 399 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 KIAA0319Q5VV43 1072 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 NUDT18Q6ZVK8 323 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 TAS1R1Q7RTX1 841 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 RBFAQ8N0V3 343 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CANT1Q8WVQ1 401 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CDKN2AIPNLQ96HQ2 116 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 SUSD3Q96L08 255 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 STN1Q9H668 368 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 GDAP2Q9NXN4 497 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CNTN6Q9UQ52 1028 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 SH3GLB1Q9Y371 365 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 OR6C75A6NL08 312 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CA12O43570 354 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 RNASEH1O60930 286 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 OTCP00480 354 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 IL4RP24394 825 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PRKCHP24723 683 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ARL4DP49703 201 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 GALK1P51570 392 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PRKAA2P54646 552 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 POLR2LP62875 67 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 SPIBQ01892 262 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 MOGSQ13724 837 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 PABPC1LQ4VXU2 614 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 SLC44A4Q53GD3 710 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 DGKKQ5KSL6 1271 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ACBD5Q5T8D3 534 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 DEF8Q6ZN54 512 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 STX19Q8N4C7 294 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ZBTB2Q8N680 514 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 BRSK1Q8TDC3 778 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 HAPLN3Q96S86 360 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 YIPF4Q9BSR8 244 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 C20orf27Q9GZN8 174 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 RNF186Q9NXI6 227 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 RAPGEFL1Q9UHV5 662 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ATP6V1HQ9UI12 483 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 MKL2Q9ULH7 1088 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 SAMHD1Q9Y3Z3 626 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 WNT6Q9Y6F9 365 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 SCN2AQ99250 2005 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 TGDSO95455 350 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 T-ENOLP0DO92 83 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 IDO1P14902 403 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 TCEA1P23193 301 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 MEF2AQ02078 507 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 SLC18A2Q05940 514 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 GRB7Q14451 532 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CWF19L1Q69YN2 538 aaKnown RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 ZNF549Q6P9A3 640 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 STK40Q8N2I9 435 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 OR9Q1Q8NGQ5 310 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 CXorf40AQ8TE69 158 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 KAT2AQ92830 837 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 AURKBQ96GD4 344 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 ZBED3Q96IU2 234 aaPredicted RBP4.73□□□□□ -1.65
UBR1-201ENST00000290650 MRGPRX2Q96LB1 330 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 ANKRD27Q96NW4 1050 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 LRTM1Q9HBL6 345 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 SNX6Q9UNH7 406 aa4.73□□□□□ -1.65
UBR1-201ENST00000290650 TAF1LQ8IZX4 1826 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms