RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TMPRSS11EQ9UL52 423 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 DNAJC15Q9Y5T4 150 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
C9orf43-201ENST00000288462 DOCK8Q8NF50 2099 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 HEPACAM2A8MVW5 462 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 THRAP10827 490 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ITGAXP20702 1163 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 DGKAP23743 735 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NFKBIAP25963 317 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 AGTR2P50052 363 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 MESP2Q0VG99 397 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ARHGEF7Q14155 803 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 PDGFRLQ15198 375 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ACSBG2Q5FVE4 666 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 GET4Q7L5D6 327 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 HSD11B1LQ7Z5J1 315 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SCUBE1Q8IWY4 988 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ENDOVQ8N8Q3 282 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 RP9Q8TA86 221 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 TRPC4APQ8TEL6 797 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NAT14Q8WUY8 206 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ZFYVE19Q96K21 471 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 MARK4Q96L34 752 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 EBF3Q9H4W6 596 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 RNPEPL1Q9HAU8 725 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 HPS4Q9NQG7 708 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SPATS2LQ9NUQ6 558 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CD274Q9NZQ7 290 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 A0A088AWK7 358 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 RGSL1A5PLK6 1076 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NCF1BA6NI72 391 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NCF1CA8MVU1 366 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 PRRT4C9JH25 899 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 EIF3FO00303 357 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 E2F3O00716 465 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SNX2O60749 519 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ENTPD5O75356 428 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 TRIM16O95361 564 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 MLYCDO95822 493 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CBSLP0DN79 551 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NCF1P14598 390 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CD1EP15812 388 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ITGB6P18564 788 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CBSP35520 551 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 MMP12P39900 470 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ATP4BP51164 291 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 FOXA1P55317 472 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ST8SIA6P61647 398 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CDC16Q13042 620 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CUL3Q13618 768 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 SQLEQ14534 574 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 GBX1Q14549 363 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 PCBP2Q15366 365 aaKnown RBP eCLIP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 FAM219BQ5XKK7 198 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 TMEM184AQ6ZMB5 413 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NET1Q7Z628 596 aaPredicted RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 HMGCLL1Q8TB92 370 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 TWIST2Q8WVJ9 160 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 PANX3Q96QZ0 392 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 THTPAQ9BU02 230 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 NUSAP1Q9BXS6 441 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 CD248Q9HCU0 757 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 RAD18Q9NS91 495 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 KCTD5Q9NXV2 234 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 EIF2B4Q9UI10 523 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 G3BP2Q9UN86 482 aaKnown RBP10.04□□□□□ -0.8
C9orf43-201ENST00000288462 OARD1Q9Y530 152 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 ASB1Q9Y576 335 aa10.04□□□□□ -0.8
C9orf43-201ENST00000288462 LOC100653049A0A140TA62 436 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 C16orf96A6NNT2 1141 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 RAD51BO15315 384 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 KRT34O76011 436 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 ESRRBO95718 433 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 SLC6A11P48066 632 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 PTK2BQ14289 1009 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 KPNB1Q14974 876 aaKnown RBP10.03□□□□□ -0.8
C9orf43-201ENST00000288462 RAB30Q15771 203 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 HENMT1Q5T8I9 393 aaKnown RBP10.03□□□□□ -0.8
C9orf43-201ENST00000288462 FRA10AC1Q70Z53 315 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 PARS2Q7L3T8 475 aaKnown RBP10.03□□□□□ -0.8
C9orf43-201ENST00000288462 SYVN1Q86TM6 617 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 OR56A4Q8NGH8 313 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 UBTD2Q8WUN7 234 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 CLPTM1LQ96KA5 538 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 C3orf30Q96M34 536 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
C9orf43-201ENST00000288462 FAM126AQ9BYI3 521 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms