RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 BOP1Q14137 746 aaKnown RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 PDGFRLQ15198 375 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 GPRC6AQ5T6X5 926 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 NXNQ6DKJ4 435 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 KIAA1211LQ6NV74 962 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 BRAT1Q6PJG6 821 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 RBM12BQ8IXT5 1001 aaKnown RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 TCF12Q99081 682 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 DRC3Q9H069 523 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 FAM83DQ9H4H8 585 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 PRSS16Q9NQE7 514 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 STK38LQ9Y2H1 464 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 PRKAB1Q9Y478 270 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 OAS3Q9Y6K5 1087 aaKnown RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ZNF7P17097 686 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 PBLDP30039 288 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 PRDX3P30048 256 aaKnown RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 GDF5P43026 501 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 FOXA1P55317 472 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 IL2P60568 153 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 NAA25Q14CX7 972 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TCEA2Q15560 299 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SCIMPQ6UWF3 145 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 VRK3Q8IV63 474 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TRPC4APQ8TEL6 797 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 DLG3Q92796 817 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SLC45A3Q96JT2 553 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 CDK15Q96Q40 435 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 ATOH8Q96SQ7 321 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 ILKAPQ9H0C8 392 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TMEM245Q9H330 911 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 PPM1HQ9ULR3 514 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SCN8AQ9UQD0 1980 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SOX1O00570 391 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SCAMP1O15126 338 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TGDSO95455 350 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 APOA4P06727 396 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SRPRAP08240 638 aaKnown RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 RBP1P09455 135 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 EEF1DP29692 281 aaKnown RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 VIPR1P32241 457 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 ARL1P40616 181 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 POLD2P49005 469 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 CNTN1Q12860 1018 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 BNIP1Q12981 228 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 ITPRIPL2Q3MIP1 535 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 AARS2Q5JTZ9 985 aaKnown RBP10.84□□□□□ -0.67
GGPS1-201ENST00000282841 LIPIQ6XZB0 460 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 GALNT7Q86SF2 657 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 RBFAQ8N0V3 343 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 LMNTD1Q8N9Z9 388 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 LYSMD1Q96S90 227 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 HBEGFQ99075 208 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 COPS8Q99627 209 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 CDH19Q9H159 772 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 TRPV4Q9HBA0 871 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 CD93Q9NPY3 652 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 LATS2Q9NRM7 1088 aa10.84□□□□□ -0.67
GGPS1-201ENST00000282841 LOC100653049A0A140TA62 436 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 MID1O15344 667 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 GRID2O43424 1007 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 KRT34O76011 436 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 ESR1P03372 595 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 NAT2P11245 290 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 GM2AP17900 193 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 PSMA3P25788 255 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 CCR7P32248 378 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 SUOXP51687 545 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 PRKAA2P54646 552 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 ACTN3Q08043 901 aaPredicted RBP10.83□□□□□ -0.68
GGPS1-201ENST00000282841 PON2Q15165 354 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 PHKG1Q16816 387 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 UNC50Q53HI1 259 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.83□□□□□ -0.68
GGPS1-201ENST00000282841 Q7L0L9 218 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 SPATS2Q86XZ4 545 aaKnown RBP10.83□□□□□ -0.68
GGPS1-201ENST00000282841 CFAP61Q8NHU2 1237 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 OR8D1Q8WZ84 308 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 MYOCQ99972 504 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 CD274Q9NZQ7 290 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 STON1Q9Y6Q2 735 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 TRPM6Q9BX84 2022 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 A8MUI8 341 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 MEI4A8MW99 385 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 ARNTLO00327 626 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 DCTN3O75935 186 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
GGPS1-201ENST00000282841 MMP12P39900 470 aa10.83□□□□□ -0.68
GGPS1-201ENST00000282841 RPL14P50914 215 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms