RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 MASP1P48740 699 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 TECRLQ5HYJ1 363 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 PLEKHH3Q7Z736 793 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SIX5Q8N196 739 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SLC47A1Q96FL8 570 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 COG8Q96MW5 612 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 NODALQ96S42 347 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 BEX2Q9BXY8 128 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 CTPS2Q9NRF8 586 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 GIMAP4Q9NUV9 329 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 HS3ST4Q9Y661 456 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 LAMB1P07942 1786 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 GLUD1P00367 558 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 GBAP04062 536 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 IDO1P14902 403 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 MATN1P21941 496 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 XPAP23025 273 aaPredicted RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 SLC6A2P23975 617 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZXDBP98169 803 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ACAP2Q15057 778 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SF1Q15637 639 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 CMPK2Q5EBM0 449 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 TBPL2Q6SJ96 375 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ATP6V0D2Q8N8Y2 350 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 FAR1Q8WVX9 515 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 NSUN3Q9H649 340 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 HMG20AQ9NP66 347 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ABCC13Q9NSE7 274 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SH3BP1Q9Y3L3 701 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 ULK1O75385 1050 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 FYNP06241 537 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 FCGR1AP12314 374 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 S100A3P33764 101 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 NCS1P62166 190 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 KCNAB2Q13303 367 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SPANXN4Q5MJ08 99 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 FAM45BPQ6NSW5 357 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZMIZ2Q8NF64 920 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 FAM45AQ8TCE6 357 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 RPF2Q9H7B2 306 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZNF696Q9H7X3 374 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 EIF2B3Q9NR50 452 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 ZDHHC7Q9NXF8 308 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 SUCOQ9UBS9 1254 aaKnown RBP11.29□□□□□ -0.6
SKP2-202ENST00000274255 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
SKP2-202ENST00000274255 ACOT8O14734 319 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SERPINA1P01009 418 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 APOA1P02647 267 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 PTNP21246 168 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 TGFBR1P36897 503 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 LCP2Q13094 533 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 PAQR9Q6ZVX9 377 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 TBC1D21Q8IYX1 336 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 C12orf42Q96LP6 360 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 LHPPQ9H008 270 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ATAD3AQ9NVI7 634 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
SKP2-202ENST00000274255 PDP1Q9P0J1 537 aaPredicted RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SCN1AP35498 2009 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SHROOM3Q8TF72 1996 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 IGKV6-21A0A0C4DH24 114 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 NPHS1O60500 1241 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MYO1DO94832 1006 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 WDR47O94967 919 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 SBK3P0C264 359 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HERVK_113P63132 956 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 GALNT2Q10471 571 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SELPLGQ14242 412 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MED22Q15528 200 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SMN1Q16637 294 aaKnown RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 CCNYL2Q5T2Q4 361 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 FBXL22Q6P050 247 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 SLC22A16Q86VW1 577 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms