RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FAM45BPQ6NSW5 357 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TIGD7Q6NT04 549 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PODNQ7Z5L7 613 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ADGRG3Q86Y34 549 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ERO1BQ86YB8 467 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 OR8H2Q8N162 312 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PLD5Q8N7P1 536 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 FAM45AQ8TCE6 357 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ATOH1Q92858 354 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PMM1Q92871 262 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SLC47A1Q96FL8 570 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PDXPQ96GD0 296 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SCYL1Q96KG9 808 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 APOL4Q9BPW4 351 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TINAGL1Q9GZM7 467 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SLC6A15Q9H2J7 730 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 FAM118AQ9NWS6 357 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ERVK-18Q9QC07 812 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 A3GALT2U3KPV4 340 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 U3KQV3 271 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 FOCADQ5VW36 1801 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SLC12A8A0AV02 714 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 LOC110117498-PIK3R3F6TDL0 507 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 INPP4BO15327 924 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TLL1O43897 1013 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TNFRSF21O75509 655 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SRP72O76094 671 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 APOC1P02654 83 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CYBBP04839 570 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CD36P16671 472 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PRKAR1BP31321 381 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PIGAP37287 484 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SP2Q02086 613 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 GABPAQ06546 454 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 IKZF1Q13422 519 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PRPSAP1Q14558 356 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SPANXN2Q5MJ10 180 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TTC23Q5W5X9 447 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TIGD3Q6B0B8 471 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 LCN8Q6JVE9 175 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 APOBEC3HQ6NTF7 200 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CDC42EP5Q6NZY7 148 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CASC4Q6P4E1 433 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 FAM178BQ8IXR5 827 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 KCT2Q8NC54 265 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SETD6Q8TBK2 473 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ENKURQ8TC29 256 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 MCOLN3Q8TDD5 553 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PCNPQ8WW12 178 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 LPPQ93052 612 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SIGLEC10Q96LC7 697 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TRNT1Q96Q11 434 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 CAMKK2Q96RR4 588 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SHARPINQ9H0F6 387 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SDHAF3Q9NRP4 125 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 KLHL21Q9UJP4 597 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 HES2Q9Y543 173 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 KPNA5O15131 536 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 RGS20O76081 388 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 EPOP01588 193 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 GPIP06744 558 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 KCNA5P22460 613 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CHRNA5P30532 468 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 LIG4P49917 911 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ISL1P61371 349 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 YBX1P67809 324 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CYP4F2P78329 520 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TFDP2Q14188 446 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 STXBP2Q15833 593 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SGCAQ16586 387 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 PTCHD3Q3KNS1 767 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FAM160B1Q5W0V3 765 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ZSWIM9Q86XI8 627 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TMC8Q8IU68 726 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CLEC4FQ8N1N0 589 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 AURKBQ96GD4 344 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CPB2Q96IY4 423 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 DCLRE1CQ96SD1 692 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 GTPBP2Q9BX10 602 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 AMBRA1Q9C0C7 1298 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FAM83DQ9H4H8 585 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MRM3Q9HC36 420 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 EXD2Q9NVH0 621 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MTMR4Q9NYA4 1195 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 GINS2Q9Y248 185 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms