RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 RAB11FIP2Q7L804 512 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CCDC103Q8IW40 242 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 FBXO39Q8N4B4 442 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 NEK11Q8NG66 645 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 SYT3Q9BQG1 590 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 APOOQ9BUR5 198 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 SYNDIG1Q9H7V2 258 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 EPB41L5Q9HCM4 733 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 NLRC4Q9NPP4 1024 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 TMEFF2Q9UIK5 374 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 APPL1Q9UKG1 709 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 FZD10Q9ULW2 581 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 GPR34Q9UPC5 381 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 ATP8A1Q9Y2Q0 1164 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 A0A1W2PNU3 283 aaPredicted RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 NVLO15381 856 aaKnown RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 CCP110O43303 1012 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 NUDT21O43809 227 aaKnown RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 PRAMEF11O60813 436 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 RPLP0P05388 317 aaKnown RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 JMJD7P0C870 316 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 LIPCP11150 499 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 CD82P27701 267 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 HOXC12P31275 282 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 UGT1A5P35504 534 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 RENBPP51606 427 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 TPI1P60174 286 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 NSUN2Q08J23 767 aaKnown RBP eCLIP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 KCNAB2Q13303 367 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 KRT31Q15323 416 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 ZSCAN23Q3MJ62 389 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 RAB6CQ53S08 254 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 MON1BQ7L1V2 547 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 FAM26EQ8N5C1 309 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 KYQ8NBH2 561 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 GPR156Q8NFN8 814 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 OR56A4Q8NGH8 313 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 KIAA1524Q8TCG1 905 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 MCEEQ96PE7 176 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 CMKLR1Q99788 373 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 RAB6CQ9H0N0 254 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 VPS16Q9H269 839 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 PCDH12Q9NPG4 1184 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 AKAP7Q9P0M2 348 aaPredicted RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 LHX3Q9UBR4 397 aa9.68□□□□□ -0.86
LRTM1-201ENST00000273286 PNMA8BQ9ULN7 279 aaPredicted RBP9.68□□□□□ -0.86
LRTM1-201ENST00000273286 TCRBV5S1A1TA0A578 114 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PALMO75781 387 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PIGNO95427 931 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 ELFN1P0C7U0 828 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 SLC5A2P31639 672 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 TRIM23P36406 574 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 BCL6P41182 706 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 AP1S1P61966 158 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 NFKB2Q00653 900 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 CYTH1Q15438 398 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 LRRC73Q5JTD7 316 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 CERCAMQ5T4B2 595 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 MROH9Q5TGP6 573 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 MRM1Q6IN84 353 aaKnown RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 CD300LDQ6UXZ3 194 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 RD3Q7Z3Z2 195 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 MILR1Q7Z6M3 343 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 ZNF761Q86XN6 746 aaPredicted RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PSTKQ8IV42 348 aaKnown RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PYROXD2Q8N2H3 581 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 TSACCQ96A04 125 aaPredicted RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 ECHDC3Q96DC8 303 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 EXOC2Q96KP1 924 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 CINPQ9BW66 212 aaPredicted RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 LRRN3Q9H3W5 708 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 LRRC19Q9H756 370 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 CAAP1Q9H8G2 361 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PDFQ9HBH1 243 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 SEPT11Q9NVA2 429 aaKnown RBP9.67□□□□□ -0.86
LRTM1-201ENST00000273286 SIRPGQ9P1W8 387 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 SIK3Q9Y2K2 1263 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 OR1A2Q9Y585 309 aa9.67□□□□□ -0.86
LRTM1-201ENST00000273286 PIEZO2Q9H5I5 2752 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 UNC13CQ8NB66 2214 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.66□□□□□ -0.86
LRTM1-201ENST00000273286 A0A1W2PQM1 296 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 FAM170AA1A519 330 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 DAPK3O43293 454 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 RNF8O76064 485 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 RECQL5O94762 991 aaPredicted RBP9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PCCBP05166 539 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 FERP16591 822 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 HSPA9P38646 679 aaKnown RBP9.66□□□□□ -0.86
LRTM1-201ENST00000273286 IL10RBQ08334 325 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 ARHGEF7Q14155 803 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 LY6DQ14210 128 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 KIF26BQ2KJY2 2108 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PRSS53Q2L4Q9 553 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 C14orf28Q4W4Y0 310 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 CLEC17AQ6ZS10 378 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms