RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 GDE1Q9NZC3 331 aa12.53□□□□□ -0.4
PRPF6-201ENST00000266079 TXNDC16Q9P2K2 825 aa12.53□□□□□ -0.4
PRPF6-201ENST00000266079 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
PRPF6-201ENST00000266079 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
PRPF6-201ENST00000266079 NYNRINQ9P2P1 1898 aaKnown RBP12.52□□□□□ -0.4
PRPF6-201ENST00000266079 J3QRK9 145 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.4
PRPF6-201ENST00000266079 PMPCBO75439 489 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 CYP17A1P05093 508 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 CKMT2P17540 419 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 GP5P40197 560 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 SOX9P48436 509 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 HK2P52789 917 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 TFF2Q03403 129 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 PMS2P3Q13401 168 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 PARP15Q460N3 678 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 MARC1Q5VT66 337 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 AFMIDQ63HM1 303 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 SLC2A7Q6PXP3 512 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 CHSY3Q70JA7 882 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 SFTPA1Q8IWL2 248 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 YAF2Q8IY57 180 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 FBXL8Q96CD0 374 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 TDRD1Q9BXT4 1180 aaKnown RBP12.52□□□□□ -0.4
PRPF6-201ENST00000266079 GIN1Q9NXP7 522 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.4
PRPF6-201ENST00000266079 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.4
PRPF6-201ENST00000266079 ERGIC3Q9Y282 383 aa12.52□□□□□ -0.4
PRPF6-201ENST00000266079 TCRBV3S1A0A5B6 114 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 MUSKO15146 869 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 MATN3O15232 486 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 GRID2O43424 1007 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 MLNP12872 115 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 MYF6P23409 242 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 CCNCP24863 283 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 GDI1P31150 447 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 MAGEA12P43365 314 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 DSC2Q02487 901 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 TMEM26Q6ZUK4 368 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 ZNF366Q8N895 744 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 ANKFN1Q8N957 763 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 GUCD1Q96NT3 240 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
PRPF6-201ENST00000266079 PRDM6Q9NQX0 595 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 VPS51Q9UID3 782 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 B3GNT3Q9Y2A9 372 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 PCDHGA7Q9Y5G6 932 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 SLC30A1Q9Y6M5 507 aa12.52□□□□□ -0.41
PRPF6-201ENST00000266079 SOCS2O14508 198 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 LATS1O95835 1130 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 POU2F2P09086 479 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 PGAM1P18669 254 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 SLC6A11P48066 632 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 PRKCQQ04759 706 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
PRPF6-201ENST00000266079 SEPT6Q14141 434 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 ZNF235Q14590 738 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 RAB39AQ14964 217 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 EML3Q32P44 896 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CHST9Q7L1S5 443 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CPXM2Q8N436 756 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 DCLK2Q8N568 766 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 OSCP1Q8WVF1 389 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 ISL2Q96A47 359 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 MARK4Q96L34 752 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CNOT6Q9ULM6 557 aaKnown RBP12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CDYLQ9Y232 598 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 ILVBLA1L0T0 632 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 GFRA2O00451 464 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 SMAD6O43541 496 aaKnown RBP12.51□□□□□ -0.41
PRPF6-201ENST00000266079 PEX11BO96011 259 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 ASGR2P07307 311 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 BMP1P13497 986 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 PFKLP17858 780 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 TFEBP19484 476 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
PRPF6-201ENST00000266079 ARF5P84085 180 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CYP2A13Q16696 494 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 GRTP1Q5TC63 336 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 SLC15A4Q8N697 577 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
PRPF6-201ENST00000266079 MFSD2AQ8NA29 543 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 CYB5D2Q8WUJ1 264 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 MAGEH1Q9H213 219 aa12.51□□□□□ -0.41
PRPF6-201ENST00000266079 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms