RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PGAM4Q8N0Y7 254 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 OR13C4Q8NGS5 318 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ROPN1LQ96C74 230 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 DTNBP1Q96EV8 351 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF607Q96SK3 696 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 FANCEQ9HB96 536 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SLC9A8Q9Y2E8 581 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ARAP2Q8WZ64 1704 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 A0A1B0GUL6 1792 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TK2O00142 265 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 HSPA7P48741 367 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 IYDQ6PHW0 289 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 AVL9Q8NBF6 648 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 ROGDIQ9GZN7 287 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 WDR55Q9H6Y2 383 aaPredicted RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TNRC6CQ9HCJ0 1690 aaKnown RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TBC1D23Q9NUY8 699 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CYTH4Q9UIA0 394 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 MYRFQ9Y2G1 1151 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 OR2AG2A6NM03 316 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CCL22O00626 93 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 SNAP91O60641 907 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TRBC1P01850 177 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 GNAZP19086 355 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 DPYSQ14117 519 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TIGD2Q4W5G0 525 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CCDC81Q6ZN84 652 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 KLHL23Q8NBE8 558 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 SIDT2Q8NBJ9 832 aaKnown RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 IRF7Q92985 503 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 SFXN1Q9H9B4 322 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 K7EPI3 171 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 KERAO60938 352 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 ENO2P09104 434 aaPredicted RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 TYRP14679 529 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 GDI1P31150 447 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 HERVK_113P63132 956 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 DPY19L1Q2PZI1 675 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 HDDC3Q8N4P3 179 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 ERVK-6Q9BXR3 956 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 C3orf18Q9UK00 162 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 GJD2Q9UKL4 321 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 E7ESA3 106 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 EPORP19235 508 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 GTF2E2P29084 291 aaKnown RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CCNHP51946 323 aaPredicted RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 PITRM1Q5JRX3 1037 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CST9Q5W186 159 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 PIGWQ7Z7B1 504 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 AMZ2Q86W34 360 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CMTM8Q8IZV2 173 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 AZIN2Q96A70 460 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 WDR6Q9NNW5 1121 aaKnown RBP14.84□□□□□ -0.03
UBE4B-201ENST00000253251 ARL8BQ9NVJ2 186 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 PCDHGB3Q9Y5G1 929 aa14.84□□□□□ -0.03
UBE4B-201ENST00000253251 OR10H2O60403 315 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 GSRP00390 522 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 NTRK1P04629 796 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 GRIA1P42261 906 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 GPX6P59796 221 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 SF1Q15637 639 aaKnown RBP14.83□□□□□ -0.03
UBE4B-201ENST00000253251 ZBTB6Q15916 424 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 PLEKHG6Q3KR16 790 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 FGD3Q5JSP0 725 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF776Q68DI1 518 aaPredicted RBP14.83□□□□□ -0.03
UBE4B-201ENST00000253251 TBC1D21Q8IYX1 336 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 ABTB1Q969K4 478 aaPredicted RBP14.83□□□□□ -0.03
UBE4B-201ENST00000253251 ERLEC1Q96DZ1 483 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 RANBP9Q96S59 729 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 TMEM209Q96SK2 561 aa14.83□□□□□ -0.03
UBE4B-201ENST00000253251 DHRS12A0PJE2 317 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 CNTN5O94779 1100 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 GSNP06396 782 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 VAV1P15498 845 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 SLC7A2P52569 658 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 SLC16A1P53985 500 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 DEFA1P59665 94 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 DEFA3P59666 94 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 COPZ1P61923 177 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 CHIT1Q13231 466 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 ARSIQ5FYB1 569 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 TJAP1Q5JTD0 557 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 GRASPQ7Z6J2 395 aaPredicted RBP14.83□□□□□ -0.04
UBE4B-201ENST00000253251 SAMD14Q8IZD0 417 aaPredicted RBP14.83□□□□□ -0.04
UBE4B-201ENST00000253251 FBXO30Q8TB52 745 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 SAMD4AQ9UPU9 718 aaKnown RBP14.83□□□□□ -0.04
UBE4B-201ENST00000253251 UBXN8O00124 270 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 AP2A2O94973 939 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 EIF2S1P05198 315 aaKnown RBP14.83□□□□□ -0.04
UBE4B-201ENST00000253251 SYN1P17600 705 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 HNF4AP41235 474 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 KCNJ2P63252 427 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 RIPK1Q13546 671 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 TEAD4Q15561 434 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 PLEKHG4Q58EX7 1191 aa14.83□□□□□ -0.04
UBE4B-201ENST00000253251 EOGTQ5NDL2 527 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms