RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 BLOC1S6Q9UL45 172 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF638Q14966 1978 aaKnown RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 MICAL3Q7RTP6 2002 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 C17orf102A2RUQ5 167 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PRKD3O94806 890 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 ODC1P11926 461 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 TGFBR1P36897 503 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 SCNN1AP37088 669 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DGKEP52429 567 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DNAJB13P59910 316 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DDX39BQ13838 428 aaKnown RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 AP5B1Q2VPB7 878 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 NCCRP1Q6ZVX7 275 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DET1Q7L5Y6 550 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 IGFN1Q86VF2 1251 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 TBC1D21Q8IYX1 336 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 THEM5Q8N1Q8 247 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 OR7A2PQ8NGA2 310 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 GIPC2Q8TF65 315 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 EEF1AKMT1Q8WVE0 214 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 TMEM125Q96AQ2 219 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 SLC25A51Q9H1U9 297 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PCDHGA8Q9Y5G5 932 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 A0A0D9SEW6 157 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 A0A1W2PP18 115 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 RASAL1O95294 804 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DLGAP3O95886 979 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 FCGR1AP12314 374 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 CTPS1P17812 591 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 AQP1P29972 269 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 CD52P31358 61 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 THPOP40225 353 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PSEN2P49810 448 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 MLLT10P55197 1068 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 SLC13A2Q13183 592 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 SYT16Q17RD7 645 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 Q6ZNX1 250 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 GPR142Q7Z601 462 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 THAP5Q7Z6K1 395 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DTWD1Q8N5C7 304 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 RTL3Q8N8U3 475 aaKnown RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 GMIPQ9P107 970 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PKP3Q9Y446 797 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 OTOFQ9HC10 1997 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 HSMCR30P0CW71 290 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 HSPA7P48741 367 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PLA2G16P53816 162 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 KCNAB2Q13303 367 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 ATP6AP1Q15904 470 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 FAM174BQ3ZCQ3 159 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 GPRIN3Q6ZVF9 776 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 TTC9BQ8N6N2 239 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 OR2T12Q8NG77 320 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 BIRC8Q96P09 236 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 IL12RB2Q99665 862 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 CNOT11Q9UKZ1 510 aaKnown RBP11.84□□□□□ -0.51
USHBP1-201ENST00000252597 CDH9Q9ULB4 789 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 LOC100506127A0A0U1RQW1 187 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 hCG_2039718K7EN88 272 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PIGAP37287 484 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 LEPRP48357 1165 aaKnown RBP11.84□□□□□ -0.51
USHBP1-201ENST00000252597 CLK1P49759 484 aaKnown RBP11.84□□□□□ -0.51
USHBP1-201ENST00000252597 IHHQ14623 411 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PIK3R6Q5UE93 754 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PRMT9Q6P2P2 845 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 PLD3Q8IV08 490 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 CLDN19Q8N6F1 224 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 LINC01465Q8N7H1 131 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 IGSF8Q969P0 613 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 ABHD16BQ9H3Z7 469 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 ABCC13Q9NSE7 274 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 FKBPLQ9UIM3 349 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 OAS3Q9Y6K5 1087 aaKnown RBP11.84□□□□□ -0.51
USHBP1-201ENST00000252597 LCTP09848 1927 aa11.84□□□□□ -0.51
USHBP1-201ENST00000252597 BTBD19C9JJ37 291 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 NBNO60934 754 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ADAM23O75077 832 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 SEC22BO75396 215 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 B3GALT4O96024 378 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 GPIP06744 558 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TPTEP56180 551 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 FAM189BP81408 668 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TRIP4Q15650 581 aaPredicted RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 INAQ16352 499 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms