RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 IL7RP16871 459 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 MSH3P20585 1137 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 GPC1P35052 558 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 ATP6V0D1P61421 351 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 TNK2Q07912 1038 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 ZNF284Q2VY69 593 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 ADAMTSL2Q86TH1 951 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 ZNF540Q8NDQ6 660 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 NUDT8Q8WV74 236 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 IRGQQ8WZA9 623 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 ABCB10Q9NRK6 738 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 SMPD3Q9NY59 655 aaPredicted RBP13.56□□□□□ -0.24
NCLN-201ENST00000246117 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 CROCCQ5TZA2 2017 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 G3V2T6 193 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 FFAR2O15552 330 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 OTCP00480 354 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 RHDQ02161 417 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 PRKCQQ04759 706 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 XKR6Q5GH73 641 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 KCTD8Q6ZWB6 473 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 CCDC103Q8IW40 242 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 LIX1Q8N485 282 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 REXO5Q96IC2 774 aaKnown RBP13.56□□□□□ -0.24
NCLN-201ENST00000246117 ASB2Q96Q27 587 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 TSC22D4Q9Y3Q8 395 aa13.56□□□□□ -0.24
NCLN-201ENST00000246117 BCAS2O75934 225 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 ALDH1A2O94788 518 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SERPINA4P29622 427 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 MRPS15P82914 257 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 CYP4F8P98187 520 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 TAZQ16635 292 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 PARP15Q460N3 678 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GPR180Q86V85 440 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 ZC3H7AQ8IWR0 971 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 C3orf30Q96M34 536 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 COPS8Q99627 209 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 PTPN18Q99952 460 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 HOPXQ9BPY8 73 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 CFAP97Q9P2B7 532 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 DNAJC15Q9Y5T4 150 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 H3BN98 237 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 K7ERQ8 282 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 FADS2O95864 444 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 IGSF6O95976 241 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GBAP04062 536 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 S100A5P33763 92 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SERPINB10P48595 397 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 EIF2B2P49770 351 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 SLC16A1P53985 500 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 TECRLQ5HYJ1 363 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 RNF19BQ6ZMZ0 732 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 C2CD4AQ8NCU7 369 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 ZFP28Q8NHY6 868 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 ITGBL1O95965 494 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 PRDX6P30041 224 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SCNN1AP37088 669 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SEPHS1P49903 392 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 OR4D1Q15615 310 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GALNT18Q6P9A2 607 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 UBE2R2Q712K3 238 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 LRRC49Q8IUZ0 686 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 FAM81AQ8TBF8 368 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.243e-12■■■■■ 112.2
NCLN-201ENST00000246117 PTERQ96BW5 349 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 MYO19Q96H55 970 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 SH3GLB1Q9Y371 365 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GMPPBQ9Y5P6 360 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 CACNA1CQ13936 2221 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SNAP29O95721 258 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 SLC7A1P30825 629 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 RPIAP49247 311 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 FAM189BP81408 668 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 IL10RBQ08334 325 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 MERTKQ12866 999 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GTF2H2Q13888 395 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 ZNF678Q5SXM1 525 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 PSAPL1Q6NUJ1 521 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 GTF2H2CQ6P1K8 395 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 STX19Q8N4C7 294 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 CENPNQ96H22 339 aaPredicted RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
NCLN-201ENST00000246117 NOL6Q9H6R4 1146 aaKnown RBP13.55□□□□□ -0.24
NCLN-201ENST00000246117 LRTM1Q9HBL6 345 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms