RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SLC11A2P49281 568 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 MRPL19P49406 292 aaKnown RBP14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TTPAP49638 278 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 POLR2JP52435 117 aaKnown RBP14.24□□□□□ -0.13
HIF3A-202ENST00000244303 HPCAP84074 193 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 ATP6AP1Q15904 470 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 SPATS1Q496A3 300 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TIGD2Q4W5G0 525 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 EFL1Q7Z2Z2 1120 aaKnown RBP14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TMEM173Q86WV6 379 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-202ENST00000244303 GPSM1Q86YR5 675 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 NPAS4Q8IUM7 802 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 CPNE9Q8IYJ1 553 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 KIAA2013Q8IYS2 634 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 SLAIN1Q8ND83 568 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TRPV3Q8NET8 790 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 OR56A4Q8NGH8 313 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 HM13Q8TCT9 377 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 CENPNQ96H22 339 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-202ENST00000244303 CDK15Q96Q40 435 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 C9orf16Q9BUW7 83 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 COMMD8Q9NX08 183 aa14.24□□□□□ -0.13
HIF3A-202ENST00000244303 TBKBP1A7MCY6 615 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 ANKRD66B4E2M5 251 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GIPC1O14908 333 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GPR39O43194 453 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 TRMUO75648 421 aaKnown RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 C1RP00736 705 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GNRH1P01148 92 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GPIP06744 558 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 RHOCP08134 193 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 PSMA3P25788 255 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 IL12AP29459 219 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 IL2P60568 153 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 ERVK-8P63133 956 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 TUBA4AP68366 448 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 SMARCB1Q12824 385 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 MERTKQ12866 999 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 ELAVL2Q12926 359 aaKnown RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GRIK2Q13002 908 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 PRSS55Q6UWB4 352 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 FAM43BQ6ZT52 329 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 GPRIN3Q6ZVF9 776 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 PTRH1Q86Y79 214 aaKnown RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 CDYL2Q8N8U2 506 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 OR52B6Q8NGF0 335 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 BCL7CQ8WUZ0 217 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 SARS2Q9NP81 518 aaKnown RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 TIMMDC1Q9NPL8 285 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 INTS7Q9NVH2 962 aaKnown RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 LEF1Q9UJU2 399 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-202ENST00000244303 USP22Q9UPT9 525 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 VPS9D1Q9Y2B5 631 aa14.23□□□□□ -0.13
HIF3A-202ENST00000244303 E5RI56 91 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 ACOX3O15254 700 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 F11P03951 625 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 MYF6P23409 242 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 NAA20P61599 178 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 PDCD4Q53EL6 469 aaKnown RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 C6orf136Q5SQH8 315 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 CRIPAKQ8N1N5 446 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 ZNF786Q8N393 782 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 FNDC5Q8NAU1 212 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TMEM175Q9BSA9 504 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TTPALQ9BTX7 342 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 MUC13Q9H3R2 512 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 IQCF5A8MTL0 148 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 STX7O15400 261 aaKnown RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 SYNCRIPO60506 623 aaKnown RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 CLDN11O75508 207 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 ERVPABLB-1P60509 514 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TRAF2Q12933 501 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TMED1Q13445 227 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 SLC36A3Q495N2 470 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 NANOGP8Q6NSW7 305 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TTC33Q6PID6 262 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 LPCAT2Q7L5N7 544 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 SPRED1Q7Z699 444 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 PROKR1Q8TCW9 393 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TTLL2Q9BWV7 592 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 PIF1Q9H611 641 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 NANOGQ9H9S0 305 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 DNAAF2Q9NVR5 837 aaKnown RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 CIDEBQ9UHD4 219 aa14.22□□□□□ -0.13
HIF3A-202ENST00000244303 TSR3Q9UJK0 312 aaKnown RBP14.22□□□□□ -0.13
HIF3A-202ENST00000244303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-202ENST00000244303 ILVBLA1L0T0 632 aa14.21□□□□□ -0.13
HIF3A-202ENST00000244303 TYW5A2RUC4 315 aaKnown RBP14.21□□□□□ -0.13
HIF3A-202ENST00000244303 EI24O14681 340 aa14.21□□□□□ -0.13
HIF3A-202ENST00000244303 PFDN6O15212 129 aa14.21□□□□□ -0.13
HIF3A-202ENST00000244303 HOXA2O43364 376 aa14.21□□□□□ -0.13
HIF3A-202ENST00000244303 TSPAN3O60637 253 aa14.21□□□□□ -0.13
HIF3A-202ENST00000244303 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms