RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PSMB4P28070 264 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 STEAP3Q658P3 488 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 BIRC7Q96CA5 298 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 TCEAL7Q9BRU2 100 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 GPN3Q9UHW5 284 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 KIAA1257Q9ULG3 409 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 MGAT4AQ9UM21 535 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PCDHGA7Q9Y5G6 932 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ELOVL7A1L3X0 281 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 MID1O15344 667 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 MPZL2O60487 215 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ADRB2P07550 413 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 BMP1P13497 986 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 CXCR2P25025 360 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 GCAP28676 217 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 IDUAP35475 653 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ATP12AP54707 1039 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 SPDYE7PQ495Y7 208 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 EXOC2Q96KP1 924 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 MROH2AA6NES4 1674 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 H3BN98 237 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 SEC14L2O76054 403 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ITGB1P05556 798 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 NCAM1P13591 858 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PRKCDQ05655 676 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 SSX2Q16385 188 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 BTBD8Q5XKL5 378 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 CMTM6Q9NX76 183 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ZDHHC2Q9UIJ5 367 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 GDF11O95390 407 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 RFC2P35250 354 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ALDH6A1Q02252 535 aaKnown RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PTGR2Q8N8N7 351 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PIH1D2Q8WWB5 315 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 C11orf24Q96F05 449 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 NKIRAS2Q9NYR9 191 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 E7ESA3 106 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 NR2F6P10588 404 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 EIF2DP41214 584 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PARP16Q8N5Y8 322 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FANK1Q8TC84 345 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 DPF3Q92784 378 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FOLH1BQ9HBA9 442 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 RC3H2Q9HBD1 1191 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FAM118AQ9NWS6 357 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PCDHA10Q9Y5I2 948 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 C9IYK1 514 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PGK1P00558 417 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 CENPAP49450 140 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 GSK3BP49841 420 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FLI1Q01543 452 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 CSTF1Q05048 431 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SPATA6LQ8N4H0 392 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 COL21A1Q96P44 957 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 NT5C1AQ9BXI3 368 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 POPDC2Q9HBU9 364 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PCDHGB3Q9Y5G1 929 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 OR5F1O95221 314 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 JUNBP17275 347 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TSPAN8P19075 237 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 S100A2P29034 98 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 HACD2Q6Y1H2 254 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 OXR1Q8N573 874 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 DPAGT1Q9H3H5 408 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TMEM138Q9NPI0 162 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 TISP43B9A030 160 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SLC30A4O14863 429 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms