RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 STX5Q13190 355 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 PTPRRQ15256 657 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MAPRE2Q15555 327 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 RBM20Q5T481 1227 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 ANKRD26P1Q6NSI1 321 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 DHFR2Q86XF0 187 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 CCDC117Q8IWD4 279 aaPredicted RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 OR13C4Q8NGS5 318 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 CHPT1Q8WUD6 406 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 TBATAQ96M53 351 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MRM3Q9HC36 420 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 FNDC3AQ9Y2H6 1198 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 DOCK6Q96HP0 2047 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 A0A0U1RQS6 177 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 LDB2O43679 373 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 NPHS1O60500 1241 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MERTKQ12866 999 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 UGP2Q16851 508 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 SAMD4BQ5PRF9 694 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 CHST9Q7L1S5 443 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 CNTN4Q8IWV2 1026 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 BBS7Q8IWZ6 715 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 OMDQ99983 421 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 POLR1BQ9H9Y6 1135 aa12.98□□□□□ -0.33
PLOD3-201ENST00000223127 TRNAU1APQ9NX07 287 aaKnown RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 MARCH4Q9P2E8 410 aaPredicted RBP12.98□□□□□ -0.33
PLOD3-201ENST00000223127 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 GREM1O60565 184 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CSKP41240 450 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CD151P48509 253 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 SLC36A3Q495N2 470 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FAM45BPQ6NSW5 357 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 OFCC1Q8IZS5 231 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 DNAJC5GQ8N7S2 189 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 OR9I1Q8NGQ6 314 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 OR6K2Q8NGY2 324 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FAM45AQ8TCE6 357 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 GPR78Q96P69 363 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 ANAPC1Q9H1A4 1944 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 SOBPA7XYQ1 873 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 K7ERQ8 282 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 INSIG1O15503 277 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 MT-CO1P00395 513 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 HNRNPLP14866 589 aaKnown RBP eCLIP12.97□□□□□ -0.33
PLOD3-201ENST00000223127 DNAJB1P25685 340 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 BMXP51813 675 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 TAS2R39P59534 338 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 TNK2Q07912 1038 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.331e-6■■□□□ 11.5
PLOD3-201ENST00000223127 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 TMC8Q8IU68 726 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 LPCAT1Q8NF37 534 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 NXNL1Q96CM4 212 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FEM1CQ96JP0 617 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CROTQ9UKG9 612 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CLEC4EQ9ULY5 219 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 CRYL1Q9Y2S2 319 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 C5orf42Q9H799 3197 aa12.97□□□□□ -0.33
PLOD3-201ENST00000223127 MROH6A6NGR9 719 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 SULT1C4O75897 302 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 GLUD1P00367 558 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 STMN1P16949 149 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 HLA-DPA1P20036 260 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 HOXD12P35452 270 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 HADHAP40939 763 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 CCR2P41597 374 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 SLC12A2P55011 1212 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 TBCELQ5QJ74 424 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 TMEM240Q5SV17 173 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 NIPAL1Q6NVV3 410 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 LILRA6Q6PI73 481 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 C7orf61Q8IZ16 206 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 ACDQ96AP0 544 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 GNPTGQ9UJJ9 305 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 LSM7Q9UK45 103 aaKnown RBP12.96□□□□□ -0.33
PLOD3-201ENST00000223127 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 PTPRSQ13332 1948 aa12.96□□□□□ -0.33
PLOD3-201ENST00000223127 NEMP2A6NFY4 417 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms