RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SLC17A6Q9P2U8 582 aa16.22■□□□□ 0.19
LIM2-201ENST00000221973 TMEM98Q9Y2Y6 226 aa16.22■□□□□ 0.19
LIM2-201ENST00000221973 GPSM3Q9Y4H4 160 aa16.22■□□□□ 0.19
LIM2-201ENST00000221973 GOLGA4Q13439 2230 aaKnown RBP16.22■□□□□ 0.19
LIM2-201ENST00000221973 LRRK1Q38SD2 2015 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 A0A1B0GTQ1 180 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 TLR4O00206 839 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 PIAS1O75925 651 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 F7P08709 466 aaPredicted RBP16.21■□□□□ 0.19
LIM2-201ENST00000221973 ACRV1P26436 265 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 AKT1P31749 480 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 STX2P32856 288 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 PHBP35232 272 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 CTBP1Q13363 440 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 CAMK2BQ13554 666 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 NFATC4Q14934 902 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 KHDC1Q4VXA5 237 aaKnown RBP16.21■□□□□ 0.19
LIM2-201ENST00000221973 AARS2Q5JTZ9 985 aaKnown RBP16.21■□□□□ 0.19
LIM2-201ENST00000221973 LDLRAP1Q5SW96 308 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 TEDDM1Q5T9Z0 273 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 CERS6Q6ZMG9 384 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 DENND6AQ8IWF6 608 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 SLC22A18ASQ8N1D0 253 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 DDHD1Q8NEL9 900 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 GPR150Q8NGU9 434 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 FAM174AQ8TBP5 190 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 MDM1Q8TC05 714 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 CALML6Q8TD86 181 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 TTC1Q99614 292 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 ZDHHC3Q9NYG2 299 aa16.21■□□□□ 0.19
LIM2-201ENST00000221973 IGSF10Q6WRI0 2623 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 COL5A1P20908 1838 aaPredicted RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 TMEM202A6NGA9 273 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 TOR1BO14657 336 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 RIPK2O43353 540 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 TNFSF14O43557 240 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 NDUFS3O75489 264 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 HOXC4P09017 264 aaPredicted RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 OGNP20774 298 aaKnown RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 HTR1BP28222 390 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 SLC1A2P43004 574 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 GRK6P43250 576 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 POLD2P49005 469 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 TTPAP49638 278 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 C21orf59P57076 290 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 KIAA1024LP59773 190 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 MAP9Q49MG5 647 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 LYPLAL1Q5VWZ2 237 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 ENPP7Q6UWV6 458 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 MARK2Q7KZI7 788 aaKnown RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 ADGRG6Q86SQ4 1221 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 IQCHQ86VS3 1027 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 CILP2Q8IUL8 1156 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 UBLCP1Q8WVY7 318 aaPredicted RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 CAVIN3Q969G5 261 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 SKA1Q96BD8 255 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 CCDC97Q96F63 343 aaPredicted RBP16.2■□□□□ 0.18
LIM2-201ENST00000221973 DCUN1D1Q96GG9 259 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 COPS8Q99627 209 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 BOCQ9BWV1 1114 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 OR2AG1Q9H205 316 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 TRIM39Q9HCM9 518 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 SMYD2Q9NRG4 433 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 ZFATQ9P243 1243 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 MOSPD1Q9UJG1 213 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 FBXO5Q9UKT4 447 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 LHX6Q9UPM6 363 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 SCN8AQ9UQD0 1980 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 DOCK9Q9BZ29 2069 aa16.2■□□□□ 0.18
LIM2-201ENST00000221973 ADAMTS20P59510 1910 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 FAM159BA6NKW6 160 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 CXorf49A8MYA2 514 aaPredicted RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 OR1I1O60431 355 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 MAGEC1O60732 1142 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 MSH3P20585 1137 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 KELP23276 732 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 PPARGP37231 505 aaPredicted RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 MPP1Q00013 466 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 B4GALNT1Q00973 533 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 OVGP1Q12889 678 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 TMEM115Q12893 351 aaPredicted RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 PTK2BQ14289 1009 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 EFTUD2Q15029 972 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIM2-201ENST00000221973 BRD3Q15059 726 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 TYSND1Q2T9J0 566 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 KBTBD12Q3ZCT8 623 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 CYS1Q717R9 158 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 DET1Q7L5Y6 550 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 SPATS2Q86XZ4 545 aaKnown RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 GATAD2AQ86YP4 633 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 CNTN4Q8IWV2 1026 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 CTAGE3PQ8IX95 158 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 LMNTD2Q8IXW0 634 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 GABPB2Q8TAK5 448 aaPredicted RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 SAP25Q8TEE9 199 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 NAT14Q8WUY8 206 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 CDKL2Q92772 493 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 WDR92Q96MX6 357 aa16.19■□□□□ 0.18
LIM2-201ENST00000221973 ELF4Q99607 663 aaPredicted RBP16.19■□□□□ 0.18
LIM2-201ENST00000221973 EPB41L4BQ9H329 900 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms