RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 C20orf96Q9NUD7 363 aaPredicted RBP23.3■■□□□ 1.32
HOMER3-201ENST00000221222 IL1RAPL1Q9NZN1 696 aa23.3■■□□□ 1.32
HOMER3-201ENST00000221222 PIKFYVEQ9Y2I7 2098 aa23.3■■□□□ 1.32
HOMER3-201ENST00000221222 SCAMP1O15126 338 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 KCNK5O95279 499 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 CD59P13987 128 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 ATP1B2P14415 290 aaPredicted RBP23.29■■□□□ 1.32
HOMER3-201ENST00000221222 NSG1P42857 185 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 THOC5Q13769 683 aaKnown RBP23.29■■□□□ 1.32
HOMER3-201ENST00000221222 TYSND1Q2T9J0 566 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 SDCCAG8Q86SQ7 713 aaPredicted RBP23.29■■□□□ 1.32
HOMER3-201ENST00000221222 LRRTM4Q86VH4 590 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 KCNMB4Q86W47 210 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 GATAD2AQ86YP4 633 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 UNC5BQ8IZJ1 945 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 EIF1ADQ8N9N8 165 aaKnown RBP23.29■■□□□ 1.32
HOMER3-201ENST00000221222 CALML6Q8TD86 181 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 CERS2Q96G23 380 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 TCF12Q99081 682 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 FMO2Q99518 471 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 PRKAB1Q9Y478 270 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 GPSM3Q9Y4H4 160 aa23.29■■□□□ 1.32
HOMER3-201ENST00000221222 ARID1BQ8NFD5 2236 aaPredicted RBP23.29■■□□□ 1.32
HOMER3-201ENST00000221222 NEMP2A6NFY4 417 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 LMO7DNF2Z398 122 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 KMOO15229 486 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 SGTAO43765 313 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 MAGEA4P43358 317 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 CTSCP53634 463 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 UAP1L1Q3KQV9 507 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 BCL7AQ4VC05 210 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 CILP2Q8IUL8 1156 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 TRAPPC5Q8IUR0 188 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 RELL1Q8IUW5 271 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 PNPLA1Q8N8W4 532 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 GSDMBQ8TAX9 411 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 SGF29Q96ES7 293 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 FAM167BQ9BTA0 163 aa23.28■■□□□ 1.32
HOMER3-201ENST00000221222 GIPC1O14908 333 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 FLRT2O43155 660 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 AP2A2O94973 939 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 CELA2BP08218 269 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 GIMD1P0DJR0 217 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 PMLP29590 882 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 NOVA1P51513 510 aaKnown RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 CTBSQ01459 385 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 ILF3Q12906 894 aaKnown RBP eCLIP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 C1orf61Q13536 156 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 SMAD1Q15797 465 aaKnown RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 HSP90AA5PQ58FG0 334 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 RNF187Q5TA31 235 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 ZNF470Q6ECI4 717 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 LVRNQ6Q4G3 990 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 TMEM220Q6QAJ8 160 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 CRTC3Q6UUV7 619 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 C11orf96Q7Z7L8 435 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 LDB1Q86U70 411 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 NRROSQ86YC3 692 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 PALM2Q8IXS6 379 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 OTUD6BQ8N6M0 293 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 TIMM29Q9BSF4 260 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 GSDMCQ9BYG8 508 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 ANKZF1Q9H8Y5 726 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 MOCS1Q9NZB8 636 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 NFU1Q9UMS0 254 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 ST14Q9Y5Y6 855 aa23.27■■□□□ 1.32
HOMER3-201ENST00000221222 DNMT3AQ9Y6K1 912 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-201ENST00000221222 OR2AG2A6NM03 316 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 TPP1O14773 563 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 PFDN6O15212 129 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 OR1I1O60431 355 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 GSTA2P09210 222 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 ZNF7P17097 686 aaPredicted RBP23.27■■□□□ 1.31
HOMER3-201ENST00000221222 TNFRSF8P28908 595 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 PRLHRP49683 370 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 DET1Q7L5Y6 550 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 CHST15Q7LFX5 561 aaPredicted RBP23.27■■□□□ 1.31
HOMER3-201ENST00000221222 GKN2Q86XP6 184 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 CNTN4Q8IWV2 1026 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 CCL4L1Q8NHW4 92 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 GABPB2Q8TAK5 448 aaPredicted RBP23.27■■□□□ 1.31
HOMER3-201ENST00000221222 LINC00615Q96LM1 132 aaPredicted RBP23.27■■□□□ 1.31
HOMER3-201ENST00000221222 C9orf72Q96LT7 481 aa23.27■■□□□ 1.31
HOMER3-201ENST00000221222 INTS10Q9NVR2 710 aaKnown RBP23.27■■□□□ 1.31
HOMER3-201ENST00000221222 COL5A1P20908 1838 aaPredicted RBP23.26■■□□□ 1.31
HOMER3-201ENST00000221222 KLHL33A6NCF5 533 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 QSOX1O00391 747 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 NDUFS3O75489 264 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 ERVK-10P10266 1014 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 ACP5P13686 325 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 GRK6P43250 576 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 CLCNKAP51800 687 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 INAVAQ3KP66 663 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 TRMT10BQ6PF06 316 aaKnown RBP23.26■■□□□ 1.31
HOMER3-201ENST00000221222 CYS1Q717R9 158 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 CLDN19Q8N6F1 224 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 NLGN3Q9NZ94 848 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 SLC23A2Q9UGH3 650 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 ANGPTL2Q9UKU9 493 aa23.26■■□□□ 1.31
HOMER3-201ENST00000221222 VPS9D1Q9Y2B5 631 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms