RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 MDGA1Q8NFP4 955 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 RNF145Q96MT1 663 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CD274Q9NZQ7 290 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 EIF2B4Q9UI10 523 aaKnown RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 ATE1O95260 518 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 CPNE6O95741 557 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 ALBP02768 609 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 HK3P52790 923 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 OR4D2P58180 307 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 GRSF1Q12849 480 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRP54-201ENST00000216774 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 GLYATQ6IB77 296 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 Q6ZSR9 355 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 CD200R1Q8TD46 325 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 EEF1AKMT1Q8WVE0 214 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 LINGO1Q96FE5 620 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 SEPHS2Q99611 448 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 ST14Q9Y5Y6 855 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 OR6C75A6NL08 312 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 ZFC3H1O60293 1989 aaKnown RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 OR4F21O95013 312 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 PRLP01236 227 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 RAP2AP10114 183 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 CR2P20023 1033 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 OR1G1P47890 313 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 CBX2Q14781 532 aaPredicted RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 CTSL3PQ5NE16 218 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 GPR107Q5VW38 600 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 SLC2A7Q6PXP3 512 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 SCIMPQ6UWF3 145 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 PIANPQ8IYJ0 282 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 THAP11Q96EK4 314 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 HSPBAP1Q96EW2 488 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 RPL10LQ96L21 214 aaKnown RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 NTN4Q9HB63 628 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 LMCD1Q9NZU5 365 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
SRP54-201ENST00000216774 PCDHGA11Q9Y5H2 935 aa13.15□□□□□ -0.3
SRP54-201ENST00000216774 KDELR3O43731 214 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 NIPSNAP2O75323 286 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 JUNBP17275 347 aaPredicted RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 SCNN1BP51168 640 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 ARSFP54793 590 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CDH4P55283 916 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 RAB15P59190 212 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 ERVPABLB-1P60509 514 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 TGFBIQ15582 683 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 FAM98BQ52LJ0 330 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 PYCR3Q53H96 274 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 PSAPL1Q6NUJ1 521 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 ELMSAN1Q6PJG2 1045 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CFAP52Q8N1V2 620 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 OR7D4Q8NG98 312 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 RDH12Q96NR8 316 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CCDC115Q96NT0 180 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 DNAAF2Q9NVR5 837 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 USP22Q9UPT9 525 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 TNPO3Q9Y5L0 923 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 UPK1AO00322 258 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 TLR5O60602 858 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 HPRP00739 348 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 ESR1P03372 595 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 MT-ND1P03886 318 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 MC4RP32245 332 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 PTGER3P43115 390 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 RGRP47804 291 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 OXCT1P55809 520 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 MRPL58Q14197 206 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 PCBP2Q15366 365 aaKnown RBP eCLIP13.14□□□□□ -0.313e-6■■■■□ 22.2
SRP54-201ENST00000216774 LETMD1Q6P1Q0 360 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms