RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CNOT1A5YKK6 2376 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 ULK1O75385 1050 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 KRT6AP02538 564 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 KRT6BP04259 564 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 KRT6CP48668 564 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CCT8P50990 548 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ACTR3P61158 418 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 SMARCB1Q12824 385 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 C16orf72Q14CZ0 275 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MAPKAPK3Q16644 382 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 OTUD1Q5VV17 481 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ANO7Q6IWH7 933 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 EFL1Q7Z2Z2 1120 aaKnown RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TRIM74Q86UV6 250 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 DHRSXQ8N5I4 330 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 SKA1Q96BD8 255 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 NSUN5Q96P11 429 aaKnown RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 SLC46A2Q9BY10 475 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM247A6NEH6 219 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MAGEC1O60732 1142 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TNFAIP8O95379 198 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 PRAMEF1O95521 474 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ATP6V1E1P36543 226 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF135P52742 658 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 AIF1P55008 147 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 YBEYP58557 167 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 HMGCS1Q01581 520 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CLCQ05315 142 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 BLMHQ13867 455 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MPPE1Q53F39 396 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CCDC157Q569K6 752 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 AFTPHQ6ULP2 937 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 FEM1CQ96JP0 617 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 FCRL5Q96RD9 977 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ZFYVE1Q9HBF4 777 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 POLR3BQ9NW08 1133 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MARCH4Q9P2E8 410 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 PSMD13Q9UNM6 376 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 PRKAB1Q9Y478 270 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MTF2Q9Y483 593 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 HCFC2Q9Y5Z7 792 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 DOCK6Q96HP0 2047 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 M0R3G1 203 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CAPN1P07384 714 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MSH3P20585 1137 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CD72P21854 359 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MAGEA11P43364 429 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TTPAP49638 278 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CLK1P49759 484 aaKnown RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 FAM189BP81408 668 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MAPK11Q15759 364 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF648Q5T619 568 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 GAREM2Q75VX8 874 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 RELL1Q8IUW5 271 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CEP19Q96LK0 163 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MAGEH1Q9H213 219 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF229Q9UJW7 825 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 E7ENX8 843 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CLIC3O95833 236 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 GM2AP17900 193 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 GDI1P31150 447 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 S100A3P33764 101 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MTPNP58546 118 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 IL10RBQ08334 325 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 PRKG2Q13237 762 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 SCAMP4Q969E2 229 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 DNAJC28Q9NX36 388 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 FETUBQ9UGM5 382 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 ANAPC2Q9UJX6 822 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 MYRFQ9Y2G1 1151 aa11.94□□□□□ -0.5
CHPF2-201ENST00000035307 TNFRSF10BO14763 440 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 UQCRBP14927 111 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 PSMB9P28065 219 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 TIE1P35590 1138 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SCNN1AP37088 669 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 PSMD8P48556 350 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 PRKAA2P54646 552 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SERINC3Q13530 473 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 ATP1A4Q13733 1029 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SHHQ15465 462 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 ATAT1Q5SQI0 421 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 IL23RQ5VWK5 629 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 NADSYN1Q6IA69 706 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM214Q6NUQ4 689 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 CD300LGQ6UXG3 332 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SATL1Q86VE3 508 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 MMAAQ8IVH4 418 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 CBR4Q8N4T8 237 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 NKAPQ8N5F7 415 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 APOLD1Q96LR9 279 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 WDR83Q9BRX9 315 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 CACNA2D2Q9NY47 1150 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SHROOM3Q8TF72 1996 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms