RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 TPTEP56180 551 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 CRY1Q16526 586 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 STEAP4Q687X5 459 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 GLYATQ6IB77 296 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 SLC24A5Q71RS6 500 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 ARHGAP12Q8IWW6 846 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 ATG16L2Q8NAA4 619 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 DNMT3LQ9UJW3 386 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 RAB26Q9ULW5 256 aa13.46□□□□□ -0.26
SEMA3F-201ENST00000002829 H3BNX3 289 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 IMPDH2P12268 514 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 ITGALP20701 1170 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PTGR1Q14914 329 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 OR4D1Q15615 310 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 LDLRAD1Q5T700 205 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PLD3Q8IV08 490 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 OPTCQ9UBM4 332 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 AOC2O75106 756 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 CDK14O94921 469 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 CHRM5P08912 532 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 SMIM18P0DKX4 95 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PRKCQQ04759 706 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 MAPKAPK3Q16644 382 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PHACTR4Q8IZ21 702 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 C7orf57Q8NEG2 295 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 ISOC1Q96CN7 298 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 INTS7Q9NVH2 962 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 RGRP47804 291 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 FAM189BP81408 668 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 BCL2L1Q07817 233 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PRKG2Q13237 762 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 LYSMD3Q7Z3D4 306 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 ZNF555Q8NEP9 628 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 SH3KBP1Q96B97 665 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 PLEKHA8Q96JA3 519 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 OSBPL11Q9BXB4 747 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 EIF3LQ9Y262 564 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
SEMA3F-201ENST00000002829 ANKRD33BA6NCL7 494 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 A8MV72 311 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ARVCFO00192 962 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ATE1O95260 518 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 NDST3O95803 873 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 UGT2B4P06133 528 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 CCNA2P20248 432 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 CYP4F8P98187 520 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 DMC1Q14565 340 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ACAP2Q15057 778 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 FAM174BQ3ZCQ3 159 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 CPSF7Q8N684 471 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 OR2T34Q8NGX1 318 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 OR2T3Q8NH03 318 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 DACT3Q96B18 629 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TAMM41Q96BW9 452 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SPO11Q9Y5K1 396 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 DNAJC15Q9Y5T4 150 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TCAF2A6NFQ2 919 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 MYCLP1P12525 358 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SERPINB1P30740 379 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 PMS2P3Q13401 168 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ANKS3Q6ZW76 656 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SPPL2AQ8TCT8 520 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 COX4I2Q96KJ9 171 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TCF12Q99081 682 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TRIM39Q9HCM9 518 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ARHGDIAP52565 204 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TRIM60Q495X7 471 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 NECAB2Q7Z6G3 386 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 Q8N9G6 341 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 RDH11Q8TC12 318 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 FEM1AQ9BSK4 669 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 OSBPL2Q9H1P3 480 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 SMOXQ9NWM0 555 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 ZNF232Q9UNY5 417 aa13.44□□□□□ -0.26
SEMA3F-201ENST00000002829 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-201ENST00000002829 FBP2O00757 339 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms