RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ABCE1P61221 599 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TMEM52BQ4KMG9 183 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 DTX3LQ8TDB6 740 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 DNASE1L2Q92874 299 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 LINGO1Q96FE5 620 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TMEM237Q96Q45 408 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TTC1Q99614 292 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 MKRN2Q9H000 416 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 SYTL2Q9HCH5 934 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 CYP4F12Q9HCS2 524 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 CD248Q9HCU0 757 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 ARL2BPQ9Y2Y0 163 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 RGSL1A5PLK6 1076 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 NPEPPSL1A6NEC2 478 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 WNT9AO14904 365 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 NPC1O15118 1278 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 SGTAO43765 313 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 SLC25A14O95258 325 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TRIM16O95361 564 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TGDSO95455 350 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 CHRNGP07510 517 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 KITP10721 976 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 MTHFD2P13995 350 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 NTSR1P30989 418 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 NAGLUP54802 743 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 HNRNPH2P55795 449 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 RPS14P62263 151 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 IFT88Q13099 833 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 SMAD2Q15796 467 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 DET1Q7L5Y6 550 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 AP2M1Q96CW1 435 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 ZSCAN5AQ9BUG6 496 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 TSR3Q9UJK0 312 aaKnown RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 UBXN8O00124 270 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 RECQL5O94762 991 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 KLF8O95600 359 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 CREB5Q02930 508 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 TSNQ15631 228 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 FAM46CQ5VWP2 391 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 RPS27LQ71UM5 84 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 PIWIL4Q7Z3Z4 852 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 CYP2U1Q7Z449 544 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 NRSN1Q8IZ57 195 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 LSMEM2Q8N112 164 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 PLCD3Q8N3E9 789 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 NKAPQ8N5F7 415 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 EXT2Q93063 718 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 KIAA1191Q96A73 305 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 FUBP1Q96AE4 644 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 TFB2MQ9H5Q4 396 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 C8orf33Q9H7E9 229 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 ABCF3Q9NUQ8 709 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 PNPOQ9NVS9 261 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 CNOT6Q9ULM6 557 aaKnown RBP17.37■□□□□ 0.37
PHGDH-232ENST00000641947 DNAJC16Q9Y2G8 782 aa17.37■□□□□ 0.37
PHGDH-232ENST00000641947 A0A1W2PP55 124 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 SYNCRIPO60506 623 aaKnown RBP17.36■□□□□ 0.37
PHGDH-232ENST00000641947 SKIV2L2P42285 1042 aaKnown RBP17.36■□□□□ 0.37
PHGDH-232ENST00000641947 PRKAA2P54646 552 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 IL2P60568 153 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 DDHD1Q8NEL9 900 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 OR2T3Q8NH03 318 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 RHEBL1Q8TAI7 183 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 HLA-CQ95604 372 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 PHF21BQ96EK2 531 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 TRIM55Q9BYV6 548 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 CDH19Q9H159 772 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 RAD18Q9NS91 495 aa17.36■□□□□ 0.37
PHGDH-232ENST00000641947 TMEM114B3SHH9 223 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 BTN3A1O00481 513 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 NEMP1O14524 444 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 KERAO60938 352 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 IPO13O94829 963 aaKnown RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ADH1BP00325 375 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 DRD1P21728 446 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 CD72P21854 359 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 AKT1P31749 480 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 DNAJB13P59910 316 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ATP6V0D1P61421 351 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 RCN2Q14257 317 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 SPRED3Q2MJR0 410 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF284Q2VY69 593 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ACSBG2Q5FVE4 666 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 UGT3A1Q6NUS8 523 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 MAVSQ7Z434 540 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 CRLF3Q8IUI8 442 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF781Q8N8C0 355 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ANKS4BQ8N8V4 417 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 BTN2A2Q8WVV5 523 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 INPP5DQ92835 1189 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 RAB7BQ96AH8 199 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 NUS1Q96E22 293 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 VPS35Q96QK1 796 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 DRC3Q9H069 523 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 NCKIPSDQ9NZQ3 722 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms