RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 IL1RL1Q01638 556 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 NR6A1Q15406 480 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 LETMD1Q6P1Q0 360 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 PLEKHG4BQ96PX9 1271 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 ANAPC2Q9UJX6 822 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 POLR3HQ9Y535 204 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 PCDHA9Q9Y5H5 950 aa13.9□□□□□ -0.18
CACNA1A-228ENST00000636610 C5orf42Q9H799 3197 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 A0A1W2PP18 115 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 KANSL1LA0AUZ9 987 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 BNIP3LO60238 219 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 RSL1D1O76021 490 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 PAPSS2O95340 614 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 GJB5O95377 273 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ZNF182P17025 639 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 DNAJB1P25685 340 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 RPS9P46781 194 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 FOXD4Q12950 439 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 RAB39AQ14964 217 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 GLYATQ6IB77 296 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 GPSM1Q86YR5 675 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TRIB2Q92519 343 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TOP1MTQ969P6 601 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 KIAA1191Q96A73 305 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 SMURF2Q9HAU4 748 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ARMC1Q9NVT9 282 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 A0A087WXM4 84 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 KERAO60938 352 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 B3GALT4O96024 378 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 LDLRP01130 860 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TACR2P21452 398 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 HMGCS1Q01581 520 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 IL10RBQ08334 325 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 C6orf136Q5SQH8 315 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 PRSS55Q6UWB4 352 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 RNF19BQ6ZMZ0 732 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ERI1Q8IV48 349 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 FAM126BQ8IXS8 530 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TM6SF2Q9BZW4 377 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ING2Q9H160 280 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 FARSBQ9NSD9 589 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 GOLGA4Q13439 2230 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-228ENST00000636610 CDH23Q9H251 3354 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 F5H5T6 163 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 DUSP11O75319 330 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 CHEK2O96017 543 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 FGF1P05230 155 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ALPIP09923 528 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 HRH2P25021 359 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 GKP32189 559 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ERVPABLB-1P60509 514 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 TRAF2Q12933 501 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 AARS2Q5JTZ9 985 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 MINDY1Q8N5J2 469 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 PROKR1Q8TCW9 393 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 AURKBQ96GD4 344 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 THUMPD3Q9BV44 507 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ABCD2Q9UBJ2 740 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SQORQ9Y6N5 450 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 KRT87PA6NCN2 255 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 PRAMEF11O60813 436 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 HOXC8P31273 242 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ATP6AP1LQ52LC2 224 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 RFTN2Q52LD8 501 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 CYBRD1Q53TN4 286 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 FRA10AC1Q70Z53 315 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SLC22A15Q8IZD6 547 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 BIRC8Q96P09 236 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 C17orf80Q9BSJ5 609 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 NPLQ9BXD5 320 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 FBXO44Q9H4M3 255 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SMPD3Q9NY59 655 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 AFF4Q9UHB7 1163 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SLC45A1Q9Y2W3 748 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 AQP12BA6NM10 295 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms