RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 HEXDCQ8WVB3 486 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 CCDC97Q96F63 343 aaPredicted RBP18.61■□□□□ 0.57
MECP2-216ENST00000627864 BOCQ9BWV1 1114 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 SLC13A1Q9BZW2 595 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 RMI1Q9H9A7 625 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 IARS2Q9NSE4 1012 aaKnown RBP18.61■□□□□ 0.57
MECP2-216ENST00000627864 PRKAB1Q9Y478 270 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 GPSM3Q9Y4H4 160 aa18.61■□□□□ 0.57
MECP2-216ENST00000627864 ZFHX2Q9C0A1 2572 aaPredicted RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 RIF1Q5UIP0 2472 aaKnown RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 FAM186AA6NE01 2351 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 ASCC3Q8N3C0 2202 aaKnown RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 A0A1B0GTQ1 180 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 GRID2O43424 1007 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 SDC3O75056 442 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 NDUFS3O75489 264 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 GSTA2P09210 222 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 FAM153BP0C7A2 387 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 CTSEP14091 401 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 TNFRSF8P28908 595 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 RXRGP48443 463 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 TTPAP49638 278 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 HNRNPKP61978 463 aaKnown RBP eCLIP18.6■□□□□ 0.57
MECP2-216ENST00000627864 B4GALNT1Q00973 533 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 BNIP3Q12983 259 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 CTBP1Q13363 440 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 ITIH4Q14624 930 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 SHBQ15464 509 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 TCEA2Q15560 299 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 KYNUQ16719 465 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 FAM153CQ494X1 144 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 PYCR3Q53H96 274 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 ZNF470Q6ECI4 717 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 TMEM220Q6QAJ8 160 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 CRTC3Q6UUV7 619 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 CCNI2Q6ZMN8 369 aaPredicted RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 C3orf62Q6ZUJ4 267 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 GALNT13Q8IUC8 556 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 EIF1ADQ8N9N8 165 aaKnown RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 CALML6Q8TD86 181 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 NAT14Q8WUY8 206 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 SGF29Q96ES7 293 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 SCARF2Q96GP6 870 aaPredicted RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 FAM167BQ9BTA0 163 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 EDEM2Q9BV94 578 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 VPS37BQ9H9H4 285 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 RXFP3Q9NSD7 469 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 APOBEC3BQ9UH17 382 aaKnown RBP18.6■□□□□ 0.57
MECP2-216ENST00000627864 DGKBQ9Y6T7 804 aa18.6■□□□□ 0.57
MECP2-216ENST00000627864 VPS13AQ96RL7 3174 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 IGLV3-16A0A075B6K0 115 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 OR2AG2A6NM03 316 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 GPR89AB7ZAQ6 455 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 CHUKO15111 745 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 FOXD2O60548 495 aaPredicted RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 GPR89BP0CG08 455 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 MYBL2P10244 700 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 ATP1B2P14415 290 aaPredicted RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 OGNP20774 298 aaKnown RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 CTSCP53634 463 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 GPX6P59796 221 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 C1orf61Q13536 156 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 LRRTM4Q86VH4 590 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 TRAPPC5Q8IUR0 188 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 DENND6AQ8IWF6 608 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 LMNTD2Q8IXW0 634 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 GABPB2Q8TAK5 448 aaPredicted RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 LMX1AQ8TE12 382 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 OR2M4Q96R27 311 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 TCF12Q99081 682 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 TMEM168Q9H0V1 697 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 LRRC4CQ9HCJ2 640 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 NINJ2Q9NZG7 142 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 SPASTQ9UBP0 616 aa18.59■□□□□ 0.57
MECP2-216ENST00000627864 PCYT1BQ9Y5K3 369 aaPredicted RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 ARID1BQ8NFD5 2236 aaPredicted RBP18.59■□□□□ 0.57
MECP2-216ENST00000627864 PFDN6O15212 129 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 OR1I1O60431 355 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 PIAS2O75928 621 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 F7P08709 466 aaPredicted RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 ZNF7P17097 686 aaPredicted RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 NSG1P42857 185 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 SLC1A2P43004 574 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 CCT8P50990 548 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 VSNL1P62760 191 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 MGAT5Q09328 741 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 FRG1Q14331 258 aaKnown RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 NAA30Q147X3 362 aaPredicted RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 SLMAPQ14BN4 828 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 PRRT3Q5FWE3 981 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 CHST15Q7LFX5 561 aaPredicted RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 CILP2Q8IUL8 1156 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 RELL1Q8IUW5 271 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 CLDN19Q8N6F1 224 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 CDC42EP4Q9H3Q1 356 aaKnown RBP18.58■□□□□ 0.56
MECP2-216ENST00000627864 TMEM9BQ9NQ34 198 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 TM7SF3Q9NS93 570 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 MOCS1Q9NZB8 636 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 FBXO5Q9UKT4 447 aa18.58■□□□□ 0.56
MECP2-216ENST00000627864 PLEKHM1Q9Y4G2 1056 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms