RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PITRM1Q5JRX3 1037 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ZNF691Q5VV52 312 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ZNF470Q6ECI4 717 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 GLYATQ6IB77 296 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 SULT1C3Q6IMI6 304 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TUBA1AQ71U36 451 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 CHST15Q7LFX5 561 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 EFL1Q7Z2Z2 1120 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 PIWIL3Q7Z3Z3 882 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 BTLAQ7Z6A9 289 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 AKAP14Q86UN6 197 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 GALNT13Q8IUC8 556 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 LYSMD2Q8IV50 215 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TMEM192Q8IY95 271 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 SVOPQ8N4V2 548 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 DPP10Q8N608 796 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 C12orf29Q8N999 325 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 PPHLN1Q8NEY8 458 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 OR13J1Q8NGT2 312 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 PPTC7Q8NI37 304 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 FAR1Q8WVX9 515 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 BRI3BPQ8WY22 251 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 VPS33AQ96AX1 596 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 PGAP3Q96FM1 320 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 C3orf30Q96M34 536 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 NSMCE2Q96MF7 247 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 SLC2A13Q96QE2 648 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 NODALQ96S42 347 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 RBM4BQ9BQ04 359 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 KCTD14Q9BQ13 255 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 CLSTN3Q9BQT9 956 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 RBM4Q9BWF3 364 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 BTBD2Q9BX70 525 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 UGT2B28Q9BY64 529 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 B3GNT5Q9BYG0 378 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 CEP41Q9BYV8 373 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 BRINP2Q9C0B6 783 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 NXF2Q9GZY0 626 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 MMP27Q9H306 513 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TRIT1Q9H3H1 467 aaKnown RBP4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 GORASP2Q9H8Y8 452 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 NEK6Q9HC98 313 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TM9SF3Q9HD45 589 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TNFRSF12AQ9NP84 129 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ENTPD7Q9NQZ7 604 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ACSS2Q9NR19 701 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 TREX1Q9NSU2 369 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.14□□□□□ -1.752e-8■■■■□ 22.7
PTP4A1-205ENST00000626021 ZIM2Q9NZV7 527 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 KLQ9UEF7 1012 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ERVW-1Q9UQF0 538 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 AP3M1Q9Y2T2 418 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ANGPTL3Q9Y5C1 460 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 PCDHGA8Q9Y5G5 932 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 GPR45Q9Y5Y3 372 aa4.14□□□□□ -1.75
PTP4A1-205ENST00000626021 ANKRD12Q6UB98 2062 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 LOC100130705A0A1B0GUX0 176 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 PABPN1LA6NDY0 278 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 NEMP2A6NFY4 417 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 F5H423 210 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 SLC1A7O00341 560 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 NR5A2O00482 541 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 UBFD1O14562 309 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 AZIN1O14977 448 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 TLL1O43897 1013 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 TPST1O60507 370 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 USP12O75317 370 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ANXA9O76027 345 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 DXOO77932 396 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 PRKD3O94806 890 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ALX3O95076 343 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 PAPSS2O95340 614 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 NADKO95544 446 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 LGALS2P05162 132 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ANXA6P08133 673 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ITGAMP11215 1152 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CPB1P15086 417 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 HOXB8P17481 243 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 IL1RNP18510 177 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CHRM3P20309 590 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 KCNA5P22460 613 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CCNCP24863 283 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 HRH2P25021 359 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 YWHAQP27348 245 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ADRA1BP35368 520 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 BMPR1AP36894 532 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 EIF2DP41214 584 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ZFP36L2P47974 494 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 GEMP55040 296 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 KCNK10P57789 538 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 OSTNP61366 133 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 HERVK_113P63132 956 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 PPP2R2BQ00005 443 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 ZNF45Q02386 682 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CHRNB3Q05901 458 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CD47Q08722 323 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 CTBP1Q13363 440 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 OLIG2Q13516 323 aa4.13□□□□□ -1.75
PTP4A1-205ENST00000626021 NFYCQ13952 458 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms