RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ISG20Q96AZ6 181 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 SDCCAG3Q96C92 435 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 RBM22Q9NW64 420 aaKnown RBP eCLIP13.99□□□□□ -0.17
LDB3-209ENST00000623056 THG1LQ9NWX6 298 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 NOX1Q9Y5S8 564 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 MCM3APO60318 1980 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 POLR2AP24928 1970 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 MATN3O15232 486 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CD4P01730 458 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CHRNA1P02708 482 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 MTHFD2P13995 350 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 PTPN2P17706 415 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 WNT3AP56704 352 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CHRNB3Q05901 458 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 HIST2H2ACQ16777 129 aaPredicted RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 SULT1C3Q6IMI6 304 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 HID1Q8IV36 788 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 PJA1Q8NG27 643 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 GLMNQ92990 594 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 BCL7BQ9BQE9 202 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 OSBPL10Q9BXB5 764 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 RGS18Q9NS28 235 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 MARCH4Q9P2E8 410 aaPredicted RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 EVLQ9UI08 416 aaPredicted RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 ZNF229Q9UJW7 825 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CRYL1Q9Y2S2 319 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 FAM92AA1XBS5 289 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 TNPO2O14787 897 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 CRCPO75575 148 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 USP2O75604 605 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 F9P00740 461 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 ANXA6P08133 673 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 IL12AP29459 219 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SERPINB1P30740 379 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 PNPLA4P41247 253 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SERPINB10P48595 397 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 MRPL19P49406 292 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 VBP1P61758 197 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 CCNA1P78396 465 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 PPP2R2BQ00005 443 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 EPS8Q12929 822 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 GRIK2Q13002 908 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 VGLL4Q14135 290 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SELPLGQ14242 412 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 NDUFA5Q16718 116 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 MIA3Q5JRA6 1907 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 GJC2Q5T442 439 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 ATAD3BQ5T9A4 648 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 UGT3A1Q6NUS8 523 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 GALNT7Q86SF2 657 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 ARMC8Q8IUR7 673 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 OR6P1Q8NGX9 317 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 PABPC5Q96DU9 382 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 CCDC97Q96F63 343 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 BTBD2Q9BX70 525 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 NECTIN3Q9NQS3 549 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 EXD2Q9NVH0 621 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 NEU3Q9UQ49 428 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 IFT52Q9Y366 437 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 CD40LGP29965 261 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 ARSDP51689 593 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 ISL1P61371 349 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SOX4Q06945 474 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 LCP2Q13094 533 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 KIAA0319Q5VV43 1072 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 BEND5Q7L4P6 421 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 FAM86B1Q8N7N1 296 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 DYNC2LI1Q8TCX1 351 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 PHF10Q8WUB8 498 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 RNF34Q969K3 372 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 BRINP2Q9C0B6 783 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SLC39A8Q9C0K1 460 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SPC25Q9HBM1 224 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 SEMA4BQ9NPR2 832 aaPredicted RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 CNGB3Q9NQW8 809 aa13.98□□□□□ -0.17
LDB3-209ENST00000623056 DICER1Q9UPY3 1922 aaKnown RBP13.98□□□□□ -0.17
LDB3-209ENST00000623056 OR51F1A6NGY5 319 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 PSMD11O00231 422 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 FDXRP22570 491 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 FSHRP23945 695 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
LDB3-209ENST00000623056 MTPNP58546 118 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 TIAL1Q01085 375 aaKnown RBP eCLIP13.97□□□□□ -0.17
LDB3-209ENST00000623056 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
LDB3-209ENST00000623056 SV2CQ496J9 727 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 KDELC1Q6UW63 502 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 AKAP14Q86UN6 197 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 TAC4Q86UU9 113 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 PPP1R2P1Q96PQ5 205 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SMOQ99835 787 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SIK2Q9H0K1 926 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms