RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FAM69BQ5VUD6 431 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 DENND1BQ6P3S1 775 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 FAM173BQ6P4H8 233 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 RHBDF2Q6PJF5 856 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 MON1AQ86VX9 555 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 TMPRSS12Q86WS5 348 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 DENND6AQ8IWF6 608 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 BLIDQ8IZY5 108 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 SRBD1Q8N5C6 995 aaKnown RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 LINC00301Q8NCQ3 95 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 TMEM170AQ8WVE7 144 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 FAM151AQ8WW52 585 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 RNF183Q96D59 192 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 TRIM44Q96DX7 344 aaPredicted RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 BICD1Q96G01 975 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 NAP1L4Q99733 375 aaKnown RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 NAT10Q9H0A0 1025 aaKnown RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 TTC12Q9H892 705 aaPredicted RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 ANKRD10Q9NXR5 420 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 VPS54Q9P1Q0 977 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 NYAP2Q9P242 653 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 MAD2L2Q9UI95 211 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 KCNJ14Q9UNX9 436 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 CLIC4Q9Y696 253 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 NFS1Q9Y697 457 aa5.07□□□□□ -1.6
VPS29-212ENST00000621131 GREB1LQ9C091 1923 aaPredicted RBP5.07□□□□□ -1.6
VPS29-212ENST00000621131 A0A0B4J293 547 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 IGKV6D-41A0A0C4DH26 115 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 CLRN2A0PK11 232 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 B9A039 149 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 BMPR1BO00238 502 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 TULP2O00295 520 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 CMA1P23946 247 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SHMT1P34896 483 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SLC1A4P43007 532 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SYKP43405 635 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 CXCR3P49682 368 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 PEX5P50542 639 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 ACTR2P61160 394 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 CXCL9Q07325 125 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 ORC2Q13416 577 aaPredicted RBP5.06□□□□□ -1.6
VPS29-212ENST00000621131 DHX34Q14147 1143 aaKnown RBP5.06□□□□□ -1.6
VPS29-212ENST00000621131 NONOQ15233 471 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS29-212ENST00000621131 SLC18A3Q16572 532 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 STX1AQ16623 288 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 TATDN1Q6P1N9 297 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 MOGAT3Q86VF5 341 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 APOBEC3FQ8IUX4 373 aaKnown RBP5.06□□□□□ -1.6
VPS29-212ENST00000621131 GHDCQ8N2G8 530 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SAMD3Q8N6K7 520 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 RFWD2Q8NHY2 731 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 TRAPPC12Q8WVT3 735 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 PIBF1Q8WXW3 757 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 HSPH1Q92598 858 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SDF4Q9BRK5 362 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 MYOZ2Q9NPC6 264 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 BARHL2Q9NY43 387 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 DONSONQ9NYP3 566 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 OR6C3Q9NZP0 311 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 PCDHAC2Q9Y5I4 1007 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 SIPA1L1O43166 1804 aa5.06□□□□□ -1.6
VPS29-212ENST00000621131 DICER1Q9UPY3 1922 aaKnown RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 ZNF541Q9H0D2 1346 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 ESYT2A0FGR8 921 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 SMCO2A6NFE2 343 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 GOLGA6L19H0YKK7 550 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 LAD1O00515 517 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 UMODP07911 640 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 GOLGA8HP0CJ92 632 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 PDHBP11177 359 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 EEF2P13639 858 aaKnown RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 PFKFB1P16118 471 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 SSTR2P30874 369 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 CHKAP35790 457 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 NOVP48745 357 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 GMPSP49915 693 aaPredicted RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 MRPL12P52815 198 aaKnown RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 GOLGA8FQ08AF8 430 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 KRT72Q14CN4 511 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 TMEM266Q2M3C6 531 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 CTXN3Q4LDR2 81 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 MEX3BQ6ZN04 569 aaKnown RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 NEK10Q6ZWH5 1172 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 PRSS45Q7RTY3 260 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 FAM160B2Q86V87 743 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 CEP57L1Q8IYX8 460 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 GMCL1P1Q8NEA9 526 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 AFG1LQ8WV93 481 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 PRMT6Q96LA8 375 aaPredicted RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 TIGD1Q96MW7 591 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 LRFN5Q96NI6 719 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 IL17FQ96PD4 163 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 CLSTN3Q9BQT9 956 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 PAGR1Q9BTK6 254 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 RAB34Q9BZG1 259 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 VAT1LQ9HCJ6 419 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 ENTPD7Q9NQZ7 604 aa5.05□□□□□ -1.6
VPS29-212ENST00000621131 SPATS2LQ9NUQ6 558 aaKnown RBP5.05□□□□□ -1.6
VPS29-212ENST00000621131 ANO10Q9NW15 660 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms