RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ERN2Q76MJ5 926 aaKnown RBP7.53□□□□□ -1.2
CBWD1-228ENST00000619157 DSG4Q86SJ6 1040 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 VPS36Q86VN1 386 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 TRIM69Q86WT6 500 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
CBWD1-228ENST00000619157 PSTKQ8IV42 348 aaKnown RBP7.53□□□□□ -1.2
CBWD1-228ENST00000619157 DEFB124Q8NES8 71 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 OR2AP1Q8NGE2 309 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 HSPH1Q92598 858 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 KLK6Q92876 244 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 ZG16BQ96DA0 208 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 EXOC2Q96KP1 924 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 HEPHQ9BQS7 1158 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 ZDHHC6Q9H6R6 413 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 CATSPERBQ9H7T0 1116 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 FZD3Q9NPG1 666 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 KLHL11Q9NVR0 708 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 IP6K2Q9UHH9 426 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 ITM2BQ9Y287 266 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 BTBD3Q9Y2F9 522 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 ANKRD6Q9Y2G4 727 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 FADS3Q9Y5Q0 445 aa7.53□□□□□ -1.2
CBWD1-228ENST00000619157 ZZEF1O43149 2961 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 DOCK9Q9BZ29 2069 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3DA0A087WVF3 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3IA0A087WXS9 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3EA0A087X179 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3KA0A087X1G2 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 A0A1W2PQU0 124 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3FA6NER0 549 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 C16orf96A6NNT2 1141 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3LB9A6J9 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 AKR1B15C9JRZ8 316 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 RAD51BO15315 384 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 MFSD11O43934 449 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 SH3BP5O60239 455 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 CBFA2T3O75081 653 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 MTA2O94776 668 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 PIGNO95427 931 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 UGT2B4P06133 528 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 H2AFZP0C0S5 128 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3HP0C7X1 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 ADRB3P13945 408 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 GNSP15586 552 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 CSRP1P21291 193 aaKnown RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 ETFBP38117 255 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 RHOAP61586 193 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 PPP2R2AP63151 447 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 MAP4K2Q12851 820 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 DPYSL3Q14195 570 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 BOLA3Q53S33 107 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 INO80DQ53TQ3 878 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TPRG1LQ5T0D9 272 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3GQ6DHY5 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3CQ6IPX1 549 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 GCNT7Q6ZNI0 430 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 H2AFVQ71UI9 128 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 RABEPKQ7Z6M1 372 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TBC1D3Q8IZP1 549 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 PGBD5Q8N414 524 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 PQLC3Q8N755 202 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 PCDH19Q8TAB3 1148 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 SLC35G2Q8TBE7 412 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 ZNF483Q8TF39 744 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TEKT4Q8WW24 435 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 FUBP1Q96AE4 644 aaKnown RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 FAF2Q96CS3 445 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 KLHL32Q96NJ5 620 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 MYOCQ99972 504 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TRIM5Q9C035 493 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 GAREM1Q9H706 876 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 CTTNBP2NLQ9P2B4 639 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 HYOU1Q9Y4L1 999 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 IGF2RP11717 2491 aa7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TPRP12270 2363 aaKnown RBP7.52□□□□□ -1.21
CBWD1-228ENST00000619157 TMEM131Q92545 1883 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 SPAARA0A1B0GVQ0 90 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 TSPAN11A1L157 253 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 ZSCAN5CA6NGD5 496 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-228ENST00000619157 C3orf70A6NLC5 250 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-228ENST00000619157 TMEM110-MUSTN1A8MSY1 372 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 MYO1FO00160 1098 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 DFFAO00273 331 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 AREL1O15033 823 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 VILLO15195 856 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 SLC31A1O15431 190 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 OPHN1O60890 802 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 LCA5LO95447 670 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 CAPNS1P04632 268 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 PRKCGP05129 697 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 MSX2P35548 267 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-228ENST00000619157 GJC1P36383 396 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 NOVA1P51513 510 aaKnown RBP7.51□□□□□ -1.21
CBWD1-228ENST00000619157 NEK3P51956 506 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 CDH6P55285 790 aa7.51□□□□□ -1.21
CBWD1-228ENST00000619157 CLDN2P57739 230 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms