RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 UBE2QL1A1L167 161 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 RPP40O75818 363 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 NPPAP01160 153 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 HSD17B2P37059 387 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 CCT3P49368 545 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 STARP49675 285 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 LIPEQ05469 1076 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 ZNF549Q6P9A3 640 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 HPS6Q86YV9 775 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 TCAIMQ8N3R3 496 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 ZFP28Q8NHY6 868 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 ZNF516Q92618 1163 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 REXO5Q96IC2 774 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 NUSAP1Q9BXS6 441 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 RAPGEFL1Q9UHV5 662 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 AGO1Q9UL18 857 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 ST3GAL5Q9UNP4 418 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 ZMYM2Q9UBW7 1377 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 TMEM88BA6NKF7 163 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 POP4O95707 220 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 LRG1P02750 347 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 GRM5P41594 1212 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 NUMBP49757 651 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 NDST2P52849 883 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 MYLK3Q32MK0 819 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 DPY19L2P1Q6NXN4 242 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 MTSS1LQ765P7 747 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 VN1R5Q7Z5H4 357 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 OAFQ86UD1 273 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 SLC22A15Q8IZD6 547 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 GPC2Q8N158 579 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 PACRGLQ8N7B6 248 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 C12orf29Q8N999 325 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 SLC35B2Q8TB61 432 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 GLT1D1Q96MS3 346 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 C2orf49Q9BVC5 232 aaPredicted RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 CEP41Q9BYV8 373 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 ADAMTS10Q9H324 1103 aa3.04□□□□□ -1.92
LPP-221ENST00000618621 NXF3Q9H4D5 531 aaKnown RBP3.04□□□□□ -1.92
LPP-221ENST00000618621 MATN3O15232 486 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DHX15O43143 795 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 FAM189A1O60320 539 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CLTBP09497 229 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 IRF8Q02556 426 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MERTKQ12866 999 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PWP1Q13610 501 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DGCR6Q14129 220 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NOMO1Q15155 1222 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CRY2Q49AN0 593 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TUBA3EQ6PEY2 450 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 ARHGAP36Q6ZRI8 547 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TREML1Q86YW5 311 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MPP5Q8N3R9 675 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 LMO3Q8TAP4 145 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TMEM159Q96B96 161 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 KIFC1Q9BW19 673 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SDCBP2Q9H190 292 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MRM3Q9HC36 420 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 SMPD3Q9NY59 655 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ZNF624Q9P2J8 865 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 TCRBV7S3A2A0A539 114 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PGM3O95394 542 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 EPHA3P29320 983 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PPP2CAP67775 309 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 GBE1Q04446 702 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 STARD3Q14849 445 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DEFB115Q30KQ5 88 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PLEKHG4Q58EX7 1191 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 OR52K2Q8NGK3 314 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SOCS4Q8WXH5 440 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SLC7A6OSQ96CW6 309 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 C1GALT1C1Q96EU7 318 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 EXOC2Q96KP1 924 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 GAD1Q99259 594 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 KLQ9UEF7 1012 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PTCH2Q9Y6C5 1203 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DIP2AQ14689 1571 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TIPRLO75663 272 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 OAS1P00973 400 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 LGALS2P05162 132 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NR2F1P10589 423 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 THRBP10828 461 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 BCAP31P51572 246 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SPIBQ01892 262 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PTPRNQ16849 979 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PTPN20Q4JDL3 420 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 RFTN2Q52LD8 501 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ZNF57Q68EA5 555 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ESRP1Q6NXG1 681 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 GATAD2AQ86YP4 633 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 LPCAT1Q8NF37 534 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 GRPEL2Q8TAA5 225 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TRAPPC12Q8WVT3 735 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 AZIN2Q96A70 460 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 OMA1Q96E52 524 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CDC6Q99741 560 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CMTM6Q9NX76 183 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PTGFRNQ9P2B2 879 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SLC9A8Q9Y2E8 581 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms