RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SGF29Q96ES7 293 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PDXPQ96GD0 296 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCF12Q99081 682 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZDHHC5Q9C0B5 715 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZCCHC2Q9C0B9 1178 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCEAL2Q9H3H9 227 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 ERVMER34-1Q9H9K5 563 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 CARS2Q9HA77 564 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 SMYD2Q9NRG4 433 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 VPS18Q9P253 973 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 SLC17A6Q9P2U8 582 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PRKAB1Q9Y478 270 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 GPSM3Q9Y4H4 160 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PRSS21Q9Y6M0 314 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TNRC6BQ9UPQ9 1833 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PFDN6O15212 129 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 GRID2O43424 1007 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 RASGRP1O95267 797 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 IVLP07476 585 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 ATP1B2P14415 290 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF7P17097 686 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 JUNDP17535 347 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 ENGP17813 658 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 STX2P32856 288 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 PHBP35232 272 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 NSG1P42857 185 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 SLC1A2P43004 574 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 HK3P52790 923 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 MPP1Q00013 466 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 TYSND1Q2T9J0 566 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF789Q5FWF6 425 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 CRTC3Q6UUV7 619 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 IL27RAQ6UWB1 636 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 TRMT10CQ7L0Y3 403 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 GALNT13Q8IUC8 556 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 PHACTR4Q8IZ21 702 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 RBFAQ8N0V3 343 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 CLDN19Q8N6F1 224 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 C2CD4AQ8NCU7 369 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 UHMK1Q8TAS1 419 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 AENQ8WTP8 325 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 SCARF2Q96GP6 870 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 GTPBP2Q9BX10 602 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 GAREM1Q9H706 876 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 RMI1Q9H9A7 625 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 FBXO6Q9NRD1 293 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 SEMA4GQ9NTN9 838 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 PCYT1BQ9Y5K3 369 aaPredicted RBP15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 DGKBQ9Y6T7 804 aa15.42■□□□□ 0.06
PCDHGC3-204ENST00000617222 UBA6A0AVT1 1052 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 OR2AG2A6NM03 316 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CXorf49A8MYA2 514 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 GPR89AB7ZAQ6 455 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 PRMT5O14744 637 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CHUKO15111 745 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 HAUS5O94927 633 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CSF2P04141 144 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 GPR89BP0CG08 455 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 NME1P15531 152 aaKnown RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 FMO4P31512 558 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 BLKP51451 505 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCEA2Q15560 299 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF423Q2M1K9 1284 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 PYCR3Q53H96 274 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 RNF187Q5TA31 235 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF449Q6P9G9 518 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 PACS1Q6VY07 963 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 ASCL5Q7RTU5 278 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 TRAPPC5Q8IUR0 188 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 OXR1Q8N573 874 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 MYRIPQ8NFW9 859 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 OR2I1PQ8NGU4 316 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 SCG3Q8WXD2 468 aaKnown RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CDKL2Q92772 493 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 ELF4Q99607 663 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CLPBQ9H078 707 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 IL21RQ9HBE5 538 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 PARD6AQ9NPB6 346 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 INTS10Q9NVR2 710 aaKnown RBP15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 CRYL1Q9Y2S2 319 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 PLEKHM1Q9Y4G2 1056 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
PCDHGC3-204ENST00000617222 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 RIPK2O43353 540 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 SGTAO43765 313 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 LRP3O75074 770 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 POP7O75817 140 aaKnown RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 AP2A2O94973 939 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 C1QAP02745 245 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 AHSGP02765 367 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 CTSEP14091 401 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 GABRB3P28472 473 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 RXRGP48443 463 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 ARRB1P49407 418 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 ATXN3P54252 364 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 EIF3BP55884 814 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms