RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DCAF4L1Q3SXM0 396 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 SLC36A3Q495N2 470 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 GALNT10Q86SR1 603 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 FUNDC1Q8IVP5 155 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 GPC2Q8N158 579 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 NEURL2Q9BR09 285 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 EHD3Q9NZN3 535 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ERVK-18Q9QC07 812 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CDH9Q9ULB4 789 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 TPRKBQ9Y3C4 175 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CPQQ9Y646 472 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ARL5AQ9Y689 179 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 BBIP1A8MTZ0 92 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 CDC7O00311 574 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 MITFO75030 526 aaPredicted RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 WDR47O94967 919 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 PRDX3P30048 256 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 KCNC1P48547 511 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ARSDP51689 593 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ATP6V0D1P61421 351 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 ACAP2Q15057 778 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 SF3B4Q15427 424 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH5-208ENST00000614547 NPTX1Q15818 432 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 UNC50Q53HI1 259 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 PAQR3Q6TCH7 311 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CLEC20AQ6ZU45 233 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 MFSD6LQ8IWD5 586 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 KATNAL1Q9BW62 490 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 RNF38Q9H0F5 515 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 MAGEE1Q9HCI5 957 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 TUBA8Q9NY65 449 aaPredicted RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 RCOR3Q9P2K3 495 aaPredicted RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 ZNFX1Q9P2E3 1918 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 A0A1W2PQ67 120 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CD3EAPO15446 510 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 TLR5O60602 858 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 NTRK1P04629 796 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 PABPC1P11940 636 aaKnown RBP11.68□□□□□ -0.54
CDH5-208ENST00000614547 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 STAG3L4Q8TBR4 150 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 C17orf50Q8WW18 174 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 IRGQQ8WZA9 623 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 TOP1MTQ969P6 601 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 FEM1CQ96JP0 617 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 NPY6RQ99463 290 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 GPR21Q99679 349 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CHCHD6Q9BRQ6 235 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 TAS2R13Q9NYV9 303 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 VPS28Q9UK41 221 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 GIT1Q9Y2X7 761 aa11.68□□□□□ -0.54
CDH5-208ENST00000614547 CCL15-CCL14A0A0B4J2E2 113 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 DCLK1O15075 740 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 TRIM24O15164 1050 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 MYCLP1P12525 358 aaPredicted RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 FSHRP23945 695 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 GRM5P41594 1212 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 NUDT6P53370 316 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 YBX1P67809 324 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 CCL15Q16663 113 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 AP5B1Q2VPB7 878 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 ZNF678Q5SXM1 525 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 UBE2UQ5VVX9 321 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 RPL3LQ92901 407 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 PCED1BQ96HM7 432 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 MYRFLQ96LU7 910 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 ZNF347Q96SE7 839 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 IL12RB2Q99665 862 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 TXNRD2Q9NNW7 524 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 AGPAT4Q9NRZ5 378 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 INTS10Q9NVR2 710 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 FBXW11Q9UKB1 542 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 PCDHGA8Q9Y5G5 932 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 PNMA8CA0A1B0GUJ8 204 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 UBFD1O14562 309 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 INPP1P49441 399 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 LILRA4P59901 499 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 CD47Q08722 323 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 FAM214AQ32MH5 1076 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 CYBRD1Q53TN4 286 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 C6orf141Q5SZD1 244 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 PTRHD1Q6GMV3 140 aaKnown RBP11.67□□□□□ -0.54
CDH5-208ENST00000614547 ENPP6Q6UWR7 440 aa11.67□□□□□ -0.54
CDH5-208ENST00000614547 GPRIN3Q6ZVF9 776 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms