RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OR56A5P0C7T3 313 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 RPS3P23396 243 aaKnown RBP eCLIP14.52□□□□□ -0.08
CD48-203ENST00000613788 SPRP35270 261 aaPredicted RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 B4GALNT1Q00973 533 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 IFFO1Q0D2I5 559 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 LPAL2Q16609 132 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 DUOXA1Q1HG43 343 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 CNSTQ6PJW8 725 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 RASGEF1AQ8N9B8 481 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 SLC44A1Q8WWI5 657 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 ATOH1Q92858 354 aaPredicted RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 MRRFQ96E11 262 aaKnown RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 MOSPD1Q9UJG1 213 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 GNPTGQ9UJJ9 305 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 CORO1CQ9ULV4 474 aaPredicted RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 GPR34Q9UPC5 381 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 PCDHGA5Q9Y5G8 931 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 PSAT1Q9Y617 370 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 COMMD10Q9Y6G5 202 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 ATXN2Q99700 1313 aaKnown RBP14.52□□□□□ -0.08
CD48-203ENST00000613788 H3BMM5 538 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 CHUKO15111 745 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 NUAK1O60285 661 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ZNF8P17098 575 aaPredicted RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 GABRB3P28472 473 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 FMO4P31512 558 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 POLD2P49005 469 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 EIF3BP55884 814 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 EFTUD2Q15029 972 aaKnown RBP eCLIP14.51□□□□□ -0.09
CD48-203ENST00000613788 ZNF789Q5FWF6 425 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 LGSNQ5TDP6 509 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 PTRHD1Q6GMV3 140 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 LAIR1Q6GTX8 287 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 TMEM220Q6QAJ8 160 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 DET1Q7L5Y6 550 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SLC22A18ASQ8N1D0 253 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 CLDN19Q8N6F1 224 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SGF29Q96ES7 293 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 PAFAH2Q99487 392 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 TSSK1BQ9BXA7 367 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 P2RY12Q9H244 342 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 RHOJQ9H4E5 214 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 KLQ9UEF7 1012 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SLC24A2Q9UI40 661 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 DNMT3AQ9Y6K1 912 aaPredicted RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 CEP192Q8TEP8 1941 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 PRSS38A1L453 326 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 GRID2O43424 1007 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 DNAJC6O75061 913 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 TCEA3O75764 348 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 EPN2O95208 641 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SHBGP04278 402 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 PKMP14618 531 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 SERPINB9P50453 376 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 BLKP51451 505 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 NXPH1P58417 271 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SRP54P61011 504 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 PPARDQ03181 441 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 FZD2Q14332 565 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 TPRG1LQ5T0D9 272 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 TAOK1Q7L7X3 1001 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 LRRTM4Q86VH4 590 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 PARGQ86W56 976 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ZC3HC1Q86WB0 502 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 TRAPPC5Q8IUR0 188 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 IQCKQ8N0W5 287 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SCARF2Q96GP6 870 aaPredicted RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 BIRC8Q96P09 236 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 RBBP8Q99708 897 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ROPN1BQ9BZX4 212 aaPredicted RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 ROPN1Q9HAT0 212 aaPredicted RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 FGF22Q9HCT0 170 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ZNHIT2Q9UHR6 403 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ZNF180Q9UJW8 692 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
CD48-203ENST00000613788 PLAAQ9Y263 795 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 ANKRD6Q9Y2G4 727 aa14.51□□□□□ -0.09
CD48-203ENST00000613788 OR2AG2A6NM03 316 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 KMOO15229 486 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 KRT38O76015 456 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 RASGRP1O95267 797 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 TNFP01375 233 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 FTH1P02794 183 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 F7P08709 466 aaPredicted RBP14.5□□□□□ -0.09
CD48-203ENST00000613788 CNTFP26441 200 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 BCL7AQ4VC05 210 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 ADGRD1Q6QNK2 874 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 LAYNQ6UX15 382 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 HDXQ7Z353 690 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 SPATS2Q86XZ4 545 aaKnown RBP14.5□□□□□ -0.09
CD48-203ENST00000613788 GALNT13Q8IUC8 556 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 OR1E3Q8WZA6 343 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 CCDC97Q96F63 343 aaPredicted RBP14.5□□□□□ -0.09
CD48-203ENST00000613788 VPS39Q96JC1 886 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 PANX3Q96QZ0 392 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 MCMBPQ9BTE3 642 aa14.5□□□□□ -0.09
CD48-203ENST00000613788 ERVMER34-1Q9H9K5 563 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms